| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is pab [H]
Identifier: 123967116
GI number: 123967116
Start: 1672366
End: 1673685
Strand: Direct
Name: pab [H]
Synonym: P9515_18831
Alternate gene names: 123967116
Gene position: 1672366-1673685 (Clockwise)
Preceding gene: 123967115
Following gene: 123967117
Centisome position: 98.13
GC content: 29.02
Gene sequence:
>1320_bases ATGAATATTAAAACAAAAAAATTATCTAAGTGGATTGATCCAGAATTAATTGCAAATCATTTGGCCTTGAAATTTGGAGA ACATGGGTTGTCCTGGTTAGATAGTGATGGAAAAGATAATGGGAAATGGTCAATAATGGGAGTGAACCCAAAAAAAATAA TTTCTTCAGGAAATATAAATAATTTAGATATTGGTAATAACCCTTTTTTAAAATTAAAAAAAATTGAGAAAGGTTTTTGG ATTGGATGGCTCAACTTTGAAGCTGGGGCTTATATTGAGCCAAAAAATCCATGGAAAAATCATGAAATATCTACTTTATG GATTGCATCGTATGATCCAATTATAAAATTTAATCTAATTTCAAATGAAATACTGCTTGAGGGAACAAATTCTGCTGAAT TAAGTAAATATGAAAAAATAATTTATGATATCGATCCTGAAAAAGAAAAAAATTCTATAAATAAAATTTTTAAATTTGAT TTTTCAAAAATTAATTTACTAAAAATAAGCAATCAATTTCAGAAAAATATTTTAAGAATTAAGCAATTAATATCTATAGG AGACATTTTTCAGGCAAATCTAACAACAAAATGTGAAGTTGAAGCTTTAGAAACTTTTAGTTATCTAAATTTATATTTAA AAATAAGAAGCAAACTACCTGCGCCTTTTGGAGGAATAATAATAAATAAATCAAAGGGTATTAACGAAGCAGTATTATCA ACCTCCCCTGAAAGATTTTTAAAAATAGACAAAGAGGGATATGTTGAATCAAGACCTATCAAAGGCACAAGGTCTAGACA TCAAGATGAAAACCAAGATGCGTTAAATGCCATAGATTTGATAACTAATGAGAAAGATAGAGCTGAAAATATTATGATTG TAGACCTCTTGAGAAATGATTTGAGCAAAGTATGCGAAGTAGGAAGTATTGAAGTGCCGGAGATATTAAAACTTGAAAGT TATTTAAAAGTCCATCATCTTACATCTGTGATTAGAGGAAAGTTAAAAAAAAATAAAAGTTGGGTAGACTTACTAATTGC TTGTTGGCCAGGGGGTTCTATCACAGGTGCTCCAAAATTAAGGTCCTGCCAAAGACTTTTTGAAATAGAAAATAGTAGCA GAGGACCTTATTGTGGATCCTTTATAAAATTAGACTGGCATGGAGAATTTGATAGCAATATACTCATAAGATCATTTATC GTAAAAAATCAGAAAATTCAAATATCTGCTGGATGCGGAATAGTAAATGATTCTGATCCAAAAGAGGAATTAAACGAACT AAAATGGAAACTTTTACCTTTAATTGATTCATTGAAATGA
Upstream 100 bases:
>100_bases AAAACATGGAGTTGTTATTCAGGTAATTTAAAACCCTGTGGGAAATGTGATAGTTGCAGAATAAGACAAACAGCCTATAA AAAATGGCAAATTAAACAAA
Downstream 100 bases:
>100_bases CGATAAGTATAGGCTGGCATAAAGATCAATGGCTAAAAATTGAAGATATTTGTATCTCAGCAAATGATAGAGGTCTAAAG TTTGGCGATGGAATATTCGA
Product: putative p-aminobenzoate synthetase
Products: NA
Alternate protein names: P-aminobenzoic acid synthase; PABA synthase [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MNIKTKKLSKWIDPELIANHLALKFGEHGLSWLDSDGKDNGKWSIMGVNPKKIISSGNINNLDIGNNPFLKLKKIEKGFW IGWLNFEAGAYIEPKNPWKNHEISTLWIASYDPIIKFNLISNEILLEGTNSAELSKYEKIIYDIDPEKEKNSINKIFKFD FSKINLLKISNQFQKNILRIKQLISIGDIFQANLTTKCEVEALETFSYLNLYLKIRSKLPAPFGGIIINKSKGINEAVLS TSPERFLKIDKEGYVESRPIKGTRSRHQDENQDALNAIDLITNEKDRAENIMIVDLLRNDLSKVCEVGSIEVPEILKLES YLKVHHLTSVIRGKLKKNKSWVDLLIACWPGGSITGAPKLRSCQRLFEIENSSRGPYCGSFIKLDWHGEFDSNILIRSFI VKNQKIQISAGCGIVNDSDPKEELNELKWKLLPLIDSLK
Sequences:
>Translated_439_residues MNIKTKKLSKWIDPELIANHLALKFGEHGLSWLDSDGKDNGKWSIMGVNPKKIISSGNINNLDIGNNPFLKLKKIEKGFW IGWLNFEAGAYIEPKNPWKNHEISTLWIASYDPIIKFNLISNEILLEGTNSAELSKYEKIIYDIDPEKEKNSINKIFKFD FSKINLLKISNQFQKNILRIKQLISIGDIFQANLTTKCEVEALETFSYLNLYLKIRSKLPAPFGGIIINKSKGINEAVLS TSPERFLKIDKEGYVESRPIKGTRSRHQDENQDALNAIDLITNEKDRAENIMIVDLLRNDLSKVCEVGSIEVPEILKLES YLKVHHLTSVIRGKLKKNKSWVDLLIACWPGGSITGAPKLRSCQRLFEIENSSRGPYCGSFIKLDWHGEFDSNILIRSFI VKNQKIQISAGCGIVNDSDPKEELNELKWKLLPLIDSLK >Mature_439_residues MNIKTKKLSKWIDPELIANHLALKFGEHGLSWLDSDGKDNGKWSIMGVNPKKIISSGNINNLDIGNNPFLKLKKIEKGFW IGWLNFEAGAYIEPKNPWKNHEISTLWIASYDPIIKFNLISNEILLEGTNSAELSKYEKIIYDIDPEKEKNSINKIFKFD FSKINLLKISNQFQKNILRIKQLISIGDIFQANLTTKCEVEALETFSYLNLYLKIRSKLPAPFGGIIINKSKGINEAVLS TSPERFLKIDKEGYVESRPIKGTRSRHQDENQDALNAIDLITNEKDRAENIMIVDLLRNDLSKVCEVGSIEVPEILKLES YLKVHHLTSVIRGKLKKNKSWVDLLIACWPGGSITGAPKLRSCQRLFEIENSSRGPYCGSFIKLDWHGEFDSNILIRSFI VKNQKIQISAGCGIVNDSDPKEELNELKWKLLPLIDSLK
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=255, Percent_Identity=38.8235294117647, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1787518, Length=266, Percent_Identity=31.5789473684211, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1786809, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=427, Percent_Identity=27.1662763466042, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6324361, Length=283, Percent_Identity=29.3286219081272, Blast_Score=94, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR006805 - InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR015890 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR005802 - InterPro: IPR006221 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind; PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 49981; Mature: 49981
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKTKKLSKWIDPELIANHLALKFGEHGLSWLDSDGKDNGKWSIMGVNPKKIISSGNIN CCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCC NLDIGNNPFLKLKKIEKGFWIGWLNFEAGAYIEPKNPWKNHEISTLWIASYDPIIKFNLI EEECCCCCCEEEEEECCCEEEEEEEECCCEEECCCCCCCCCCEEEEEEECCCCEEEEEEE SNEILLEGTNSAELSKYEKIIYDIDPEKEKNSINKIFKFDFSKINLLKISNQFQKNILRI CCEEEEECCCCHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH KQLISIGDIFQANLTTKCEVEALETFSYLNLYLKIRSKLPAPFGGIIINKSKGINEAVLS HHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHC TSPERFLKIDKEGYVESRPIKGTRSRHQDENQDALNAIDLITNEKDRAENIMIVDLLRND CCCHHHEEECCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHCCEEEHHHHHHH LSKVCEVGSIEVPEILKLESYLKVHHLTSVIRGKLKKNKSWVDLLIACWPGGSITGAPKL HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH RSCQRLFEIENSSRGPYCGSFIKLDWHGEFDSNILIRSFIVKNQKIQISAGCGIVNDSDP HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHCCCCEEEEEECCCCCCCCCH KEELNELKWKLLPLIDSLK HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIKTKKLSKWIDPELIANHLALKFGEHGLSWLDSDGKDNGKWSIMGVNPKKIISSGNIN CCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCC NLDIGNNPFLKLKKIEKGFWIGWLNFEAGAYIEPKNPWKNHEISTLWIASYDPIIKFNLI EEECCCCCCEEEEEECCCEEEEEEEECCCEEECCCCCCCCCCEEEEEEECCCCEEEEEEE SNEILLEGTNSAELSKYEKIIYDIDPEKEKNSINKIFKFDFSKINLLKISNQFQKNILRI CCEEEEECCCCHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH KQLISIGDIFQANLTTKCEVEALETFSYLNLYLKIRSKLPAPFGGIIINKSKGINEAVLS HHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHC TSPERFLKIDKEGYVESRPIKGTRSRHQDENQDALNAIDLITNEKDRAENIMIVDLLRND CCCHHHEEECCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHCCEEEHHHHHHH LSKVCEVGSIEVPEILKLESYLKVHHLTSVIRGKLKKNKSWVDLLIACWPGGSITGAPKL HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH RSCQRLFEIENSSRGPYCGSFIKLDWHGEFDSNILIRSFIVKNQKIQISAGCGIVNDSDP HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHCCCCEEEEEECCCCCCCCCH KEELNELKWKLLPLIDSLK HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8472954 [H]