Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is nrdG [C]

Identifier: 123967114

GI number: 123967114

Start: 1671025

End: 1671696

Strand: Direct

Name: nrdG [C]

Synonym: P9515_18811

Alternate gene names: 123967114

Gene position: 1671025-1671696 (Clockwise)

Preceding gene: 123967113

Following gene: 123967115

Centisome position: 98.05

GC content: 29.61

Gene sequence:

>672_bases
ATGACAAATTTCTTACCATTAGTAGAAAAATTTCATTCATTACAAGGGGAGGGCTTTCATACAGGTCAAAGTGCATTTTT
TATACGACTAGCTGGCTGTAACGTTGGATGTCCATGGTGCGATACTAAACATTCTTGGGATAAAGAAAAATTTCCTTTAA
TATCAATTCAAGAAATCATAAATGAAATAAAAAGGGCTCGAAAACAAGGGGCATCTTTTTTAGTAATAACTGGTGGTGAG
CCTTTACATCATAACTTAGATAATTTATGCCAAGCTATCAATGAAGAAACTTCTACGGAAAATCAAAGCCCAATTAAGAT
TCATATTGAAACCAGTGGTGTAAGCAATTTGTCAGGTAGTTTTGATTGGATTACTTTATCTCCTAAAAGACACCAACCCC
CAAAAACTTATTTTTTGAAAAATTGTAATGAATTAAAAATAATTATCAATGATCAAAAAGATATTGATTTTGCAATCGAT
ATAAAGCAAGAAATTATGAATAAGTATCAGAATTCTTCATCAACAAAGAATTTTTATAAGTTGGATAAAAAATATTATTT
ACAACCTGCATGGCAAAACGATGATGGGTTTTCCCTTACAATTGATTTTATTAAAAATAATCCTGAATGGAATTTGAGTC
TTCAAACACATAAGTACTTAAAAATCAAATAA

Upstream 100 bases:

>100_bases
GACCAGGAAAGCCCCATCCTTTATTTAAAGGCTTGATAAAAGCATCTCGAGAAAAATTAGAGCAATCAAAATAATATTAT
TTATTTTTTTGCATTAAATA

Downstream 100 bases:

>100_bases
TTTATATGAATTTAGAAAACAAATCTGCAGTAATTTTATTATCGGGTGGCTTAGATTCTTCAACTGTCACAGGCTTAGCA
AAAGCCTCCAAGGCAAAGAT

Product: putative organic radical activating protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEIINEIKRARKQGASFLVITGGE
PLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGSFDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAID
IKQEIMNKYQNSSSTKNFYKLDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK

Sequences:

>Translated_223_residues
MTNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEIINEIKRARKQGASFLVITGGE
PLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGSFDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAID
IKQEIMNKYQNSSSTKNFYKLDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK
>Mature_222_residues
TNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEIINEIKRARKQGASFLVITGGEP
LHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGSFDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAIDI
KQEIMNKYQNSSSTKNFYKLDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcF and H.influenzae HI_1189 [H]

Homologues:

Organism=Escherichia coli, GI1789139, Length=240, Percent_Identity=35, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 25767; Mature: 25635

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEII
CCCHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHH
NEIKRARKQGASFLVITGGEPLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGS
HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC
FDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAIDIKQEIMNKYQNSSSTKNFYK
EEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCHHHH
LDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK
HCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEEC
>Mature Secondary Structure 
TNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEII
CCHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHH
NEIKRARKQGASFLVITGGEPLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGS
HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC
FDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAIDIKQEIMNKYQNSSSTKNFYK
EEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCHHHH
LDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK
HCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]