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The map label for this gene is ydjX [C]

Identifier: 123967105

GI number: 123967105

Start: 1659707

End: 1660318

Strand: Reverse

Name: ydjX [C]

Synonym: P9515_18721

Alternate gene names: 123967105

Gene position: 1660318-1659707 (Counterclockwise)

Preceding gene: 123967106

Following gene: 123967101

Centisome position: 97.43

GC content: 26.31

Gene sequence:

>612_bases
ATGTCTTCTTTTTTTGAAAATATTTATGATTTAGCCTTTTTTTTTAATACAAATATTGGTATTTTTGCTTTTATTTTTCT
TTATATTTTAATTATTTTATTAATTCTTCCCGCCTCTTGGTTATCTTTATTATCTGGTTTTTTATATGGTTCCTATCTCG
GCTCAATCATAGTTTTTTGTGCGGCAGTTATTGGTGCTTCAATAGCATACTTTATTTCAAAAAGTTTTTTATCAAAAAAG
CTGAAAAAAATTATTAATCGTTATCCAAGATTAAGTCTTATGGAACAAGTAGTGCAGAAGGGTGGTCTTAAATTAATACT
TTTAGCAAGACTTTCCCCACTCTTTCCTTTTAGTATTCTTAATTATTTTTATGGGTTAAATAATATTAAATTTAGAGATT
TTGCTTTAGGTCTTCTTGGAATTATTCCAGGAACATTTCTTTATTGTTCTATAGGTAGCTTGGCAAAAAGTTTGCAGGAT
TTAAAAAATTTACAACCAAATAATAATATACTGATTACTACTATAAGTGTGATTTCTACATTGATGGTTGTATATTTTTC
AGCAAAGTACGCTAGAGAATATATTAATGAGTCAAAAGAAATTAATCCTTAA

Upstream 100 bases:

>100_bases
AAAGCTCCAAGAGATATTGTTGATGAATGTTTTGTTAAGTTAAAAGAGGGAAATTTGCAATCTGAAAGAATCAATAAGAA
ACTTAACTTATTAAAGTAAT

Downstream 100 bases:

>100_bases
TATTCCAATCTCTTATAGACGCAATGATGATAAACCAATAAAGTCTTAATTTCCCAAGCACACTTTTATTAGCTTCTAAT
TCGATGTATTTTGATTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSSFFENIYDLAFFFNTNIGIFAFIFLYILIILLILPASWLSLLSGFLYGSYLGSIIVFCAAVIGASIAYFISKSFLSKK
LKKIINRYPRLSLMEQVVQKGGLKLILLARLSPLFPFSILNYFYGLNNIKFRDFALGLLGIIPGTFLYCSIGSLAKSLQD
LKNLQPNNNILITTISVISTLMVVYFSAKYAREYINESKEINP

Sequences:

>Translated_203_residues
MSSFFENIYDLAFFFNTNIGIFAFIFLYILIILLILPASWLSLLSGFLYGSYLGSIIVFCAAVIGASIAYFISKSFLSKK
LKKIINRYPRLSLMEQVVQKGGLKLILLARLSPLFPFSILNYFYGLNNIKFRDFALGLLGIIPGTFLYCSIGSLAKSLQD
LKNLQPNNNILITTISVISTLMVVYFSAKYAREYINESKEINP
>Mature_202_residues
SSFFENIYDLAFFFNTNIGIFAFIFLYILIILLILPASWLSLLSGFLYGSYLGSIIVFCAAVIGASIAYFISKSFLSKKL
KKIINRYPRLSLMEQVVQKGGLKLILLARLSPLFPFSILNYFYGLNNIKFRDFALGLLGIIPGTFLYCSIGSLAKSLQDL
KNLQPNNNILITTISVISTLMVVYFSAKYAREYINESKEINP

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=141, Percent_Identity=31.2056737588652, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1788049, Length=172, Percent_Identity=27.3255813953488, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22900; Mature: 22768

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFFENIYDLAFFFNTNIGIFAFIFLYILIILLILPASWLSLLSGFLYGSYLGSIIVFC
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVIGASIAYFISKSFLSKKLKKIINRYPRLSLMEQVVQKGGLKLILLARLSPLFPFSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHHHH
NYFYGLNNIKFRDFALGLLGIIPGTFLYCSIGSLAKSLQDLKNLQPNNNILITTISVIST
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
LMVVYFSAKYAREYINESKEINP
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSFFENIYDLAFFFNTNIGIFAFIFLYILIILLILPASWLSLLSGFLYGSYLGSIIVFC
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVIGASIAYFISKSFLSKKLKKIINRYPRLSLMEQVVQKGGLKLILLARLSPLFPFSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHHHH
NYFYGLNNIKFRDFALGLLGIIPGTFLYCSIGSLAKSLQDLKNLQPNNNILITTISVIST
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
LMVVYFSAKYAREYINESKEINP
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]