| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967101
Identifier: 123967101
GI number: 123967101
Start: 1657077
End: 1657604
Strand: Reverse
Name: 123967101
Synonym: P9515_18681
Alternate gene names: NA
Gene position: 1657604-1657077 (Counterclockwise)
Preceding gene: 123967105
Following gene: 123967100
Centisome position: 97.27
GC content: 26.89
Gene sequence:
>528_bases ATGTCTGTAATTCCTCTTTTACCAATATTCCATAAATTTAATAAGCAATTTTTTGATCAATCTCTAACAATTAATAAAGA GCCTTTAGTAAAGGTTAGATGGAGTGATAACAGATTAAAAACAACTGCAGGTTTTTATAAGCGAAAACAATTTAATGGAG TTATTGATTCTGAGATTATTTTATCAAAGCCAATTTTAAGTAAATTATCGTCTAATCAAATTTATAGTACGCTCTGCCAT GAAATGATTCATGCCTGGGTAGATAGGATTTTGAATATTAATGAGATACACGGGCCAAATTTTCTAAGTAAAATGAACCA AATCAACAAAGAAGAAAAAAATTTTCAGATAAGTATTAGACATAATTTTCCAGTTGAAAGAAAAGCATTAAAATATATAG GAAAATGCTTAAATTGCGGGGAGAAATATATGTATAGAAAAAGGATGAAGAATATCGCTTGTAAAAAATGCTGTAATTTG TTTTTTAATGGATCTTGGAATAAAAACTGTTTAATTTTATTTGATTGA
Upstream 100 bases:
>100_bases AGTAATGCATCCATTTTAAAATTTGATTTTTTTTAATTTTAAGAAAATAAATCGTTTTTGATGACTTTTTTTGTCAAAAT AATACTAAATTTAATCGATA
Downstream 100 bases:
>100_bases CAATTTAAAAATGTGATTATGTTTCTTTATTTAGAATTTCCTATTATGTTGTTGTAACTTGATATTTAAAACAAAGATAA TTTATGGATTCTCGCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSVIPLLPIFHKFNKQFFDQSLTINKEPLVKVRWSDNRLKTTAGFYKRKQFNGVIDSEIILSKPILSKLSSNQIYSTLCH EMIHAWVDRILNINEIHGPNFLSKMNQINKEEKNFQISIRHNFPVERKALKYIGKCLNCGEKYMYRKRMKNIACKKCCNL FFNGSWNKNCLILFD
Sequences:
>Translated_175_residues MSVIPLLPIFHKFNKQFFDQSLTINKEPLVKVRWSDNRLKTTAGFYKRKQFNGVIDSEIILSKPILSKLSSNQIYSTLCH EMIHAWVDRILNINEIHGPNFLSKMNQINKEEKNFQISIRHNFPVERKALKYIGKCLNCGEKYMYRKRMKNIACKKCCNL FFNGSWNKNCLILFD >Mature_174_residues SVIPLLPIFHKFNKQFFDQSLTINKEPLVKVRWSDNRLKTTAGFYKRKQFNGVIDSEIILSKPILSKLSSNQIYSTLCHE MIHAWVDRILNINEIHGPNFLSKMNQINKEEKNFQISIRHNFPVERKALKYIGKCLNCGEKYMYRKRMKNIACKKCCNLF FNGSWNKNCLILFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20696; Mature: 20564
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIPLLPIFHKFNKQFFDQSLTINKEPLVKVRWSDNRLKTTAGFYKRKQFNGVIDSEII CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHH LSKPILSKLSSNQIYSTLCHEMIHAWVDRILNINEIHGPNFLSKMNQINKEEKNFQISIR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCEEEEEE HNFPVERKALKYIGKCLNCGEKYMYRKRMKNIACKKCCNLFFNGSWNKNCLILFD ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC >Mature Secondary Structure SVIPLLPIFHKFNKQFFDQSLTINKEPLVKVRWSDNRLKTTAGFYKRKQFNGVIDSEII CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHH LSKPILSKLSSNQIYSTLCHEMIHAWVDRILNINEIHGPNFLSKMNQINKEEKNFQISIR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCEEEEEE HNFPVERKALKYIGKCLNCGEKYMYRKRMKNIACKKCCNLFFNGSWNKNCLILFD ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA