Click here to switch to the map view.

The map label for this gene is 123967036

Identifier: 123967036

GI number: 123967036

Start: 1588890

End: 1589678

Strand: Reverse

Name: 123967036

Synonym: P9515_18031

Alternate gene names: NA

Gene position: 1589678-1588890 (Counterclockwise)

Preceding gene: 123967037

Following gene: 123967035

Centisome position: 93.28

GC content: 32.83

Gene sequence:

>789_bases
ATGAAAAGTACTAAAAAGATTAAGCCTTATTTTTTATTGATTTGTTTTTTGATTAATATCTTATGTGTTTCGCCAAGTTT
TTCGTTAAGTTCAAAGGAAAATTTTTTTAAAAATGCTTTAAATTTAAGTTCCAGCGGAGAATTTAATCTCGCATTAAAAC
AATGGAATAATTATTTGGAATTATTTCCTGATGATGCAGCTGCTTTAAGTAACAGAGGAAATATAAAACTTGTTATTGGT
GATCCCGAAGGCGCAATAGAGGATCAAGATAAGGCCATTGCTTTAGATCCTAATGAGTTAGATCCCTATATTAATAGAGG
TATAGTAAAAGAATCTCTAGGTCTTTGGTTACAGGCAAAAAATGATTATCTATATGTGATTTCGAAAGATAAAAATAATT
TTTCTGCTTTATATAATCTTGCTAATGTTGAAGGTTCTTTGTCAGATTGGCAGAGTGCAAGGGATTTGTTTTCTCAAGCT
TCAGAATCAAATACTGGTTTCGCTATGGCACGATCAAGTATGGCTTTGGCCGACTATCAATTAGGAAAAATGGAAGAGAG
TGAAAAAGAATTAAAAAAATTGATTAGGCGTTATCCAACTTTTGCCGATGCGAGAGCAGCATTAACAGCCTTGGAATGGT
CAAAAGGGATTTCTGGTGAAGCTGAAAGTAACTGGATAGCAGTTATGGAATTAGACTCAAGATATGCTGATGAGGAATGG
TTAATCAAAGTTCGAAGATGGCCTCAAAAACCAACTAAAGATTTGATGAGATTTATAGCTCTTAAATAA

Upstream 100 bases:

>100_bases
TTTGTAGTTGAGCCATATTTAATTCAAATTGGGTTTATTATGAGAACTCCTCGAGGAAGAAAACTTACATCTTTAGGGAA
AAAGTATATTAGTTCCAACA

Downstream 100 bases:

>100_bases
TAGATGGATACACATAAATTGTTAAAAAAAATTGATTCATTCAACGATGAACTTATTAGTATTAGACGGCATATTCATGC
TCATCCAGAATTAAGTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Protein; Tfp Pilus Assembly Protein PilF; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKSTKKIKPYFLLICFLINILCVSPSFSLSSKENFFKNALNLSSSGEFNLALKQWNNYLELFPDDAAALSNRGNIKLVIG
DPEGAIEDQDKAIALDPNELDPYINRGIVKESLGLWLQAKNDYLYVISKDKNNFSALYNLANVEGSLSDWQSARDLFSQA
SESNTGFAMARSSMALADYQLGKMEESEKELKKLIRRYPTFADARAALTALEWSKGISGEAESNWIAVMELDSRYADEEW
LIKVRRWPQKPTKDLMRFIALK

Sequences:

>Translated_262_residues
MKSTKKIKPYFLLICFLINILCVSPSFSLSSKENFFKNALNLSSSGEFNLALKQWNNYLELFPDDAAALSNRGNIKLVIG
DPEGAIEDQDKAIALDPNELDPYINRGIVKESLGLWLQAKNDYLYVISKDKNNFSALYNLANVEGSLSDWQSARDLFSQA
SESNTGFAMARSSMALADYQLGKMEESEKELKKLIRRYPTFADARAALTALEWSKGISGEAESNWIAVMELDSRYADEEW
LIKVRRWPQKPTKDLMRFIALK
>Mature_262_residues
MKSTKKIKPYFLLICFLINILCVSPSFSLSSKENFFKNALNLSSSGEFNLALKQWNNYLELFPDDAAALSNRGNIKLVIG
DPEGAIEDQDKAIALDPNELDPYINRGIVKESLGLWLQAKNDYLYVISKDKNNFSALYNLANVEGSLSDWQSARDLFSQA
SESNTGFAMARSSMALADYQLGKMEESEKELKKLIRRYPTFADARAALTALEWSKGISGEAESNWIAVMELDSRYADEEW
LIKVRRWPQKPTKDLMRFIALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI17647755, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585827, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585829, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29691; Mature: 29691

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTKKIKPYFLLICFLINILCVSPSFSLSSKENFFKNALNLSSSGEFNLALKQWNNYLE
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCCCEE
LFPDDAAALSNRGNIKLVIGDPEGAIEDQDKAIALDPNELDPYINRGIVKESLGLWLQAK
ECCCHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCHHCCHHHHHHHHHHHHCEEEEEC
NDYLYVISKDKNNFSALYNLANVEGSLSDWQSARDLFSQASESNTGFAMARSSMALADYQ
CCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGKMEESEKELKKLIRRYPTFADARAALTALEWSKGISGEAESNWIAVMELDSRYADEEW
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHH
LIKVRRWPQKPTKDLMRFIALK
HHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKSTKKIKPYFLLICFLINILCVSPSFSLSSKENFFKNALNLSSSGEFNLALKQWNNYLE
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCCCEE
LFPDDAAALSNRGNIKLVIGDPEGAIEDQDKAIALDPNELDPYINRGIVKESLGLWLQAK
ECCCHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCHHCCHHHHHHHHHHHHCEEEEEC
NDYLYVISKDKNNFSALYNLANVEGSLSDWQSARDLFSQASESNTGFAMARSSMALADYQ
CCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGKMEESEKELKKLIRRYPTFADARAALTALEWSKGISGEAESNWIAVMELDSRYADEEW
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHH
LIKVRRWPQKPTKDLMRFIALK
HHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA