| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is glgP [H]
Identifier: 123967021
GI number: 123967021
Start: 1574506
End: 1577070
Strand: Direct
Name: glgP [H]
Synonym: P9515_17881
Alternate gene names: 123967021
Gene position: 1574506-1577070 (Clockwise)
Preceding gene: 123967016
Following gene: 123967024
Centisome position: 92.39
GC content: 35.4
Gene sequence:
>2565_bases ATGGCTAACGTCATATATATGTTAAAACCCATGAATTCCAACGAACCCTTTGATCTACGCTTGCCTACCCCAGGCTGCTA TCTAGATCCTGAGAAAGCTGGCATGGATTCGGATGCGCTCTTCAAAGGAATGACAGCGCACTTGTTCTTTACTCTTGGTA AATTAGCGACCTCGGCAAGCCCTCATGACTTGTATATGGCTTTGAGTTATGCAGTGAAGGATAGATTGATGACAAGATAT TTAGCTAGTCAAGAAGTAATACGTAAGAAACCTCAAAAAACGGTTGCATACTTATCAGCAGAATTTTTAATCGGTCCACA ATTAAGCAACAATTTATTAAATCTTGGCATTACTCAAGAAGCAGAAGACGCCTTAAAAAGGTTTGGGATAGAATCATTAT CAACAATTCTTGAAGTCGAAGAAGAACCAGGTTTAGGTAATGGCGGATTGGGAAGACTTGCAGCATGTTATATGGAATCT TTAGCATCCTTACAAGTTCCTGCTGTAGGTTATGGAATTAGATATGAATTTGGCATATTTAATCAGTTAATACGAGATGG TTGGCAAGTTGAGGTTACTGATAAATGGCTTAAAGGTGGCTGGCCATGGGAGTTACCTCAACCTGATGAATCTTGTTTTG TTGGATTTGGAGGAAGAACTGAAAGTTATAGAGACGATAAAGGAAACTACAGATCAAGATGGGTTCCTTCTGAACATGCA ATTGGGGTTCCTCATGATGTTCCCGTATTAGGTTATAGAGTAAATACTTGTGACAGATTAAGATTATGGAGAGCTGATGC GACAGAAAGTTTTGATTTTTATGCTTTCAATATTGGTGACTACTATGGTGCTGTTGAAGAAAAAGTTGCTTCTGAAACTT TATCAAAAGTTCTTTACCCAAATGATGGAACAGATGAAGGGAGAAGATTAAGACTCAAACAACAACATTTCTTTGTTAGT TGTTCTCTCCAAGATATGTTGAGAAGTCTGGAAAAAAGATCTATCCCAATAACAGAATTTGCTCAACATTGGACTGTTCA GTTAAATGACACTCATCCTGCTATTGCCGTTGCTGAATTAATGCGACTATTAATAGATCAGTATCAAGTAGGATGGGATA AGGCATGGAATATAACAACTTCTTCAGTAGCTTATACAAATCATACATTACTTCCAGAAGCATTAGAAAAATGGGATTTA AGCCTTTTTAGTGATTTACTTCCTCGCCACCTAGAAATTATTTACGAAGTTAATTGGAGATTTTTGCAGCAATTAAGACT TCGTTATCCAGGTGATGACAAGATTTTACAAAAGCTATCAATAATTGACGAAGAAGGTTCAAAGTCTGTGAGAATGGCTC ATTTAGCAACCATTGGAGCTCATCATATTAATGGGGTTGCTGCGCTTCACTCAGATCTCATCAAAAGGCAACTTCTTCCA GAATTTGCAGAACTTTGGCCAGAAAAGTTTACAAATGTAACTAATGGAGTAACTCCTAGAAGATGGGTCGCATTAGCCAA TCCATCCTTATCAAATTTATTAGAAAAAGAGGTAGGTCCAAATTGGATTACCAATATGGAACTTTTGAAGAAATTGGAAA AGAAAAAAGATGATGCAAATTTCTTACAAAAATTTGAAGAAACTAAATTAATAGGAAAACGTAAACTTGCTAGTTTTATC CATTCTAAGACAGGAATTCTTGTTGATCCTTCAAGTATGTTTGATGTTCAGGTAAAACGAATTCATCAATATAAAAGACA ACATTTAAATGCTTTGCAGATCATTGCTCAATATTTAAGAATTAAAAATGGGGCAAGTAACTATAAAGCTCCCCGAACAG TAATTTTTGGTGGTAAAGCTGCTCCTGGTTACTTTATGGCTAAATTGATGATCCGCTTTATTAATGGTATCGCCGATGTC GTTAATTCAGACCCAGACATGGATGGTCTTTTAAGAGTAGTTTTCTTACCCGATTATAATGTGAAGCTTGGGGAAATAGT TTATCCTGCAACAGATCTATCTGAACAAATTTCAACTGCAGGGAAAGAAGCTTCAGGTACAGGAAATATGAAATTTGCTA TGAATGGAGCTTTGACTATAGGAACGCTTGATGGAGCAAATGTAGAATTGAGGGATCTAGTAAAGAAAGAAAATTTCTTC CTTTTCGGAAAGACTGAAAGTGAAATAATGAATTTAAAAAACAATGGCTATTCTCCTAAGTCTTTCATTAATAATAGTCC TGAGTTAAAAGAAGTAATTCGTTTAATAGAAATAGGGCATTTTAGTAACGGAGATAAGGAATTATTCAAACCTTTATTGA ATAGTTTGACCGGGAATGATCCATTTTTCGTAATGGCTGATTTCGAAGACTATTTAAATAAACAAGATGAAGTGAGCAAT TGCTGGAATAATAAAAAAGCATGGAATAAAATGGCTCTATTAAATACTGCAAGATCTGGATATTTTTCTTCAGATAGATC AATTAGAGAATATTGTGATTCTATTTGGAAAGTTTCACCTATGCCAGTTGAAATTACATGTGATATTGAAGAAGTGACTA ATTAG
Upstream 100 bases:
>100_bases AGATAGTTTATGATGGGCCCACTTTACGAAGTCTGTAAAAAAAAGAAAAAATACTCAACAAGTGTGGATCTGAAGTTACA ACAAAGAATTTGTAAAAAAA
Downstream 100 bases:
>100_bases AATTATTCTTATCAGGTAAATCTGGTGTTTGATGAAATAATCTATTTAATATTAATCTATCAATATTTAGTGGATCCGGA GCCAACTTCTTCGATATTTC
Product: phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 853
Protein sequence:
>854_residues MANVIYMLKPMNSNEPFDLRLPTPGCYLDPEKAGMDSDALFKGMTAHLFFTLGKLATSASPHDLYMALSYAVKDRLMTRY LASQEVIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEDALKRFGIESLSTILEVEEEPGLGNGGLGRLAACYMES LASLQVPAVGYGIRYEFGIFNQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWVPSEHA IGVPHDVPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDEGRRLRLKQQHFFVS CSLQDMLRSLEKRSIPITEFAQHWTVQLNDTHPAIAVAELMRLLIDQYQVGWDKAWNITTSSVAYTNHTLLPEALEKWDL SLFSDLLPRHLEIIYEVNWRFLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLP EFAELWPEKFTNVTNGVTPRRWVALANPSLSNLLEKEVGPNWITNMELLKKLEKKKDDANFLQKFEETKLIGKRKLASFI HSKTGILVDPSSMFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGASNYKAPRTVIFGGKAAPGYFMAKLMIRFINGIADV VNSDPDMDGLLRVVFLPDYNVKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFF LFGKTESEIMNLKNNGYSPKSFINNSPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGNDPFFVMADFEDYLNKQDEVSN CWNNKKAWNKMALLNTARSGYFSSDRSIREYCDSIWKVSPMPVEITCDIEEVTN
Sequences:
>Translated_854_residues MANVIYMLKPMNSNEPFDLRLPTPGCYLDPEKAGMDSDALFKGMTAHLFFTLGKLATSASPHDLYMALSYAVKDRLMTRY LASQEVIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEDALKRFGIESLSTILEVEEEPGLGNGGLGRLAACYMES LASLQVPAVGYGIRYEFGIFNQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWVPSEHA IGVPHDVPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDEGRRLRLKQQHFFVS CSLQDMLRSLEKRSIPITEFAQHWTVQLNDTHPAIAVAELMRLLIDQYQVGWDKAWNITTSSVAYTNHTLLPEALEKWDL SLFSDLLPRHLEIIYEVNWRFLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLP EFAELWPEKFTNVTNGVTPRRWVALANPSLSNLLEKEVGPNWITNMELLKKLEKKKDDANFLQKFEETKLIGKRKLASFI HSKTGILVDPSSMFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGASNYKAPRTVIFGGKAAPGYFMAKLMIRFINGIADV VNSDPDMDGLLRVVFLPDYNVKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFF LFGKTESEIMNLKNNGYSPKSFINNSPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGNDPFFVMADFEDYLNKQDEVSN CWNNKKAWNKMALLNTARSGYFSSDRSIREYCDSIWKVSPMPVEITCDIEEVTN >Mature_853_residues ANVIYMLKPMNSNEPFDLRLPTPGCYLDPEKAGMDSDALFKGMTAHLFFTLGKLATSASPHDLYMALSYAVKDRLMTRYL ASQEVIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEDALKRFGIESLSTILEVEEEPGLGNGGLGRLAACYMESL ASLQVPAVGYGIRYEFGIFNQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWVPSEHAI GVPHDVPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDEGRRLRLKQQHFFVSC SLQDMLRSLEKRSIPITEFAQHWTVQLNDTHPAIAVAELMRLLIDQYQVGWDKAWNITTSSVAYTNHTLLPEALEKWDLS LFSDLLPRHLEIIYEVNWRFLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLPE FAELWPEKFTNVTNGVTPRRWVALANPSLSNLLEKEVGPNWITNMELLKKLEKKKDDANFLQKFEETKLIGKRKLASFIH SKTGILVDPSSMFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGASNYKAPRTVIFGGKAAPGYFMAKLMIRFINGIADVV NSDPDMDGLLRVVFLPDYNVKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFFL FGKTESEIMNLKNNGYSPKSFINNSPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGNDPFFVMADFEDYLNKQDEVSNC WNNKKAWNKMALLNTARSGYFSSDRSIREYCDSIWKVSPMPVEITCDIEEVTN
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=819, Percent_Identity=47.4969474969475, Blast_Score=746, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=809, Percent_Identity=45.7354758961681, Blast_Score=731, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=822, Percent_Identity=45.7420924574209, Blast_Score=719, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=705, Percent_Identity=48.5106382978723, Blast_Score=697, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=45.5639097744361, Blast_Score=634, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=788, Percent_Identity=46.4467005076142, Blast_Score=733, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=829, Percent_Identity=44.7527141133896, Blast_Score=718, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=820, Percent_Identity=46.8292682926829, Blast_Score=749, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=820, Percent_Identity=46.8292682926829, Blast_Score=749, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=833, Percent_Identity=44.1776710684274, Blast_Score=654, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=807, Percent_Identity=45.4770755885998, Blast_Score=717, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=807, Percent_Identity=45.4770755885998, Blast_Score=717, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96783; Mature: 96652
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVIYMLKPMNSNEPFDLRLPTPGCYLDPEKAGMDSDALFKGMTAHLFFTLGKLATSAS CCCEEEEEEECCCCCCEEEECCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC PHDLYMALSYAVKDRLMTRYLASQEVIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEECCCCCCCCEECCCCHH AEDALKRFGIESLSTILEVEEEPGLGNGGLGRLAACYMESLASLQVPAVGYGIRYEFGIF HHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHH NQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWVPSEHA HHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC IGVPHDVPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYP CCCCCCCCEEEEEECCHHHHEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC NDGTDEGRRLRLKQQHFFVSCSLQDMLRSLEKRSIPITEFAQHWTVQLNDTHPAIAVAEL CCCCCCCHHEEEEEHHEEEEECHHHHHHHHHHCCCCHHHHCCCEEEEECCCCHHHHHHHH MRLLIDQYQVGWDKAWNITTSSVAYTNHTLLPEALEKWDLSLFSDLLPRHLEIIYEVNWR HHHHHHHHHCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLP HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFAELWPEKFTNVTNGVTPRRWVALANPSLSNLLEKEVGPNWITNMELLKKLEKKKDDAN HHHHHCHHHHHHHHCCCCCHHEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH FLQKFEETKLIGKRKLASFIHSKTGILVDPSSMFDVQVKRIHQYKRQHLNALQIIAQYLR HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKNGASNYKAPRTVIFGGKAAPGYFMAKLMIRFINGIADVVNSDPDMDGLLRVVFLPDYN HCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC VKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFF CEECCEEECCCCHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHCCEE LFGKTESEIMNLKNNGYSPKSFINNSPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGND EEECCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC PFFVMADFEDYLNKQDEVSNCWNNKKAWNKMALLNTARSGYFSSDRSIREYCDSIWKVSP CEEEEECHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC MPVEITCDIEEVTN CCEEEEECHHHHCC >Mature Secondary Structure ANVIYMLKPMNSNEPFDLRLPTPGCYLDPEKAGMDSDALFKGMTAHLFFTLGKLATSAS CCEEEEEEECCCCCCEEEECCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC PHDLYMALSYAVKDRLMTRYLASQEVIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEECCCCCCCCEECCCCHH AEDALKRFGIESLSTILEVEEEPGLGNGGLGRLAACYMESLASLQVPAVGYGIRYEFGIF HHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHH NQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWVPSEHA HHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC IGVPHDVPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYP CCCCCCCCEEEEEECCHHHHEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC NDGTDEGRRLRLKQQHFFVSCSLQDMLRSLEKRSIPITEFAQHWTVQLNDTHPAIAVAEL CCCCCCCHHEEEEEHHEEEEECHHHHHHHHHHCCCCHHHHCCCEEEEECCCCHHHHHHHH MRLLIDQYQVGWDKAWNITTSSVAYTNHTLLPEALEKWDLSLFSDLLPRHLEIIYEVNWR HHHHHHHHHCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLP HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFAELWPEKFTNVTNGVTPRRWVALANPSLSNLLEKEVGPNWITNMELLKKLEKKKDDAN HHHHHCHHHHHHHHCCCCCHHEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH FLQKFEETKLIGKRKLASFIHSKTGILVDPSSMFDVQVKRIHQYKRQHLNALQIIAQYLR HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKNGASNYKAPRTVIFGGKAAPGYFMAKLMIRFINGIADVVNSDPDMDGLLRVVFLPDYN HCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC VKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFF CEECCEEECCCCHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHCCEE LFGKTESEIMNLKNNGYSPKSFINNSPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGND EEECCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC PFFVMADFEDYLNKQDEVSNCWNNKKAWNKMALLNTARSGYFSSDRSIREYCDSIWKVSP CEEEEECHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC MPVEITCDIEEVTN CCEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]