| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is fusA [H]
Identifier: 123966922
GI number: 123966922
Start: 1485123
End: 1487198
Strand: Reverse
Name: fusA [H]
Synonym: P9515_16891
Alternate gene names: 123966922
Gene position: 1487198-1485123 (Counterclockwise)
Preceding gene: 123966923
Following gene: 123966921
Centisome position: 87.27
GC content: 38.92
Gene sequence:
>2076_bases TTGGCACGCGACTTTCCCCTTGAACGAGTAAGGAATATAGGTATAGCCGCTCATATTGATGCTGGTAAAACAACTACTAC TGAAAGAATACTTTTTTATTCAGGGGTTGTTCACAAAATCGGAGAAGTACATGATGGTGCTGCAGTAACGGATTGGATGG ACCAAGAAAGAGAAAGAGGGATTACCATCACAGCTGCTGCAATCTCTACAAGTTGGCAGGATCATAGAATTAATATCATT GATACTCCAGGTCACGTTGACTTCACAATTGAAGTAGAAAGATCAATGAGAGTTTTAGATGGTGTCATAGCTGTATTTTG TGCTGTTGGAGGAGTTCAGCCACAATCAGAGACTGTATGGAGACAAGCTGATAGATATTCTGTTCCAAGGATGGTCTTCG TCAATAAAATGGACAGAACAGGAGCAGACTTTTTAAAAGTTAATAAACAAATTAAAGAGCGCCTCAAAGCAAATGCTTTC CCTATTCAGCTACCGATTGGTGCTGAGGGTGATCTTACAGGAATTATCGATTTAGTTAGTAACAAGGCTTACTTATACAA AAATGATTTAGGGACTGATATTGAGGAGGCTCCAATACCAGATGAGATGAAAGATGAGGCATTGGAGTGGAGAAGTAAGC TAATGGAAAGTGTCGCAGAAAATGACGAAGAATTAATTGAAATATTTTTGGATAAAGGAGAATTAACTGAAGATCAATTA AAAAAAGGCATTAGAGAAGGAGTTCTTAAGCATGGTTTAGTTCCCGTTTTATGTGGATCAGCCTTTAAAAATAAAGGGGT TCAATTAGTTCTTGATGCAGTAGTTGATTATTTGCCAGCTCCAGTTGATGTAAAGCCAATTCAAGGGGTTTTACCAAATG GTAAAGAAGATATCAGACCCTCAGATGATAATGCGCCTTTCAGTGCATTAGCTTTTAAAGTAATGTCAGATCCTTACGGA AAACTAACTTTTGTAAGAATGTATTCAGGAGTGCTTTCAAAAGGTAGTTATGTTATGAATTCAACTAAGGATGCTAAGGA GAGAATCTCTAGATTAGTAATCTTAAAAGCTGATGAAAGGGAAGAAGTTGATGAATTAAGAGCAGGTGATTTAGGGGCTG TTTTAGGCTTGAAAAACACAACAACTGGTGACACATTATGTACTACGGATGATCCAATAGTTCTAGAAACTTTATTTATT CCTGAACCAGTTATTTCAGTTGCTGTTGAACCTAAAACTAAAGGAGATATGGAAAAGCTCTCAAAAGCTTTACAAGCCTT ATCAGAGGAAGATCCAACCTTCAGGGTTAGCACAGATCAAGAGACGAATCAGACCGTTATAGCTGGTATGGGTGAATTAC ATTTGGAAATACTTGTAGATAGAATGTTAAGAGAGTTTAAAGTTGAGGCAAATATCGGTGCTCCTCAAGTCTCGTATAGA GAAACAATCAGATCTAGTTCTAGGGGTGAAGGTAAGTATGCAAGACAAACAGGAGGTAAGGGGCAGTATGGACACGTAGT TATTGAAATGGAACCTGCTGAAGTTGGTAAAGGTTTTGAATTTGTTAACAAAATTGTTGGTGGAACAGTTCCAAAAGAAT ATATTGGACCAGCTTCAAATGGGATGAAAGAAACCTGTGAATCAGGCGTTCTTGCCGGTTATCCGCTGATTGATGTAAAA GTAACACTAGTCGATGGTTCGTTCCACGATGTAGACTCTTCTGAAATGGCCTTCAAAATTGCAGGTTCCATGGCTTTTAA AGATGGGGTTAAAAAATGCAATCCTGTCCTATTAGAGCCTATGATGAAAGTTGAGGTCGAAAGTCCTGATGATTTTCTTG GATCTGTAATTGGTGACCTCTCCTCAAGGAGAGGTCAAGTCGAAGGACAATCTGTCGATGATGGATTGTCTAAAGTACAG GCCAAAGTGCCTTTAGCCGAAATGTTCGGTTATGCCACTCAACTCCGATCAATGACACAAGGTCGGGGTATATTTTCAAT GGAGTTCGCAAATTATGAGGAAGTTCCTCGTAATGTTGCTGAAGCTATCATTTCCAAGAATCAGGGCAACTCCTGA
Upstream 100 bases:
>100_bases CGACCCAAAATGGTCCTTAATTAGTCTATTATTGTAAGAAGTTTATTTGATTAGATAAACTGCAGCTATTTAGCAATTCA TTCTATTTGGAGTTTTAACA
Downstream 100 bases:
>100_bases TCTCTAAACTAAACACTCTTTAACCCTCGATTCTTTAATTCAAATGGCTCGCGAGAAGTTCGAAAGGAACAAACCACATG TCAACATAGGTACTATCGGC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMDQERERGITITAAAISTSWQDHRINII DTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVNKQIKERLKANAF PIQLPIGAEGDLTGIIDLVSNKAYLYKNDLGTDIEEAPIPDEMKDEALEWRSKLMESVAENDEELIEIFLDKGELTEDQL KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPNGKEDIRPSDDNAPFSALAFKVMSDPYG KLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADEREEVDELRAGDLGAVLGLKNTTTGDTLCTTDDPIVLETLFI PEPVISVAVEPKTKGDMEKLSKALQALSEEDPTFRVSTDQETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR ETIRSSSRGEGKYARQTGGKGQYGHVVIEMEPAEVGKGFEFVNKIVGGTVPKEYIGPASNGMKETCESGVLAGYPLIDVK VTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQ AKVPLAEMFGYATQLRSMTQGRGIFSMEFANYEEVPRNVAEAIISKNQGNS
Sequences:
>Translated_691_residues MARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMDQERERGITITAAAISTSWQDHRINII DTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVNKQIKERLKANAF PIQLPIGAEGDLTGIIDLVSNKAYLYKNDLGTDIEEAPIPDEMKDEALEWRSKLMESVAENDEELIEIFLDKGELTEDQL KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPNGKEDIRPSDDNAPFSALAFKVMSDPYG KLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADEREEVDELRAGDLGAVLGLKNTTTGDTLCTTDDPIVLETLFI PEPVISVAVEPKTKGDMEKLSKALQALSEEDPTFRVSTDQETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR ETIRSSSRGEGKYARQTGGKGQYGHVVIEMEPAEVGKGFEFVNKIVGGTVPKEYIGPASNGMKETCESGVLAGYPLIDVK VTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQ AKVPLAEMFGYATQLRSMTQGRGIFSMEFANYEEVPRNVAEAIISKNQGNS >Mature_690_residues ARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMDQERERGITITAAAISTSWQDHRINIID TPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVNKQIKERLKANAFP IQLPIGAEGDLTGIIDLVSNKAYLYKNDLGTDIEEAPIPDEMKDEALEWRSKLMESVAENDEELIEIFLDKGELTEDQLK KGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPNGKEDIRPSDDNAPFSALAFKVMSDPYGK LTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADEREEVDELRAGDLGAVLGLKNTTTGDTLCTTDDPIVLETLFIP EPVISVAVEPKTKGDMEKLSKALQALSEEDPTFRVSTDQETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYRE TIRSSSRGEGKYARQTGGKGQYGHVVIEMEPAEVGKGFEFVNKIVGGTVPKEYIGPASNGMKETCESGVLAGYPLIDVKV TLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQA KVPLAEMFGYATQLRSMTQGRGIFSMEFANYEEVPRNVAEAIISKNQGNS
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=697, Percent_Identity=43.4720229555237, Blast_Score=573, Evalue=1e-163, Organism=Homo sapiens, GI19923640, Length=728, Percent_Identity=39.5604395604396, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI25306287, Length=727, Percent_Identity=37.5515818431912, Blast_Score=444, Evalue=1e-124, Organism=Homo sapiens, GI25306283, Length=445, Percent_Identity=42.9213483146067, Blast_Score=327, Evalue=3e-89, Organism=Homo sapiens, GI157426893, Length=157, Percent_Identity=37.5796178343949, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI4503483, Length=483, Percent_Identity=23.8095238095238, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=38.0597014925373, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310132016, Length=118, Percent_Identity=38.135593220339, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI310110807, Length=118, Percent_Identity=38.135593220339, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI310123363, Length=118, Percent_Identity=38.135593220339, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI94966752, Length=192, Percent_Identity=26.5625, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1789738, Length=699, Percent_Identity=61.2303290414878, Blast_Score=867, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=473, Percent_Identity=28.7526427061311, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI48994988, Length=203, Percent_Identity=37.9310344827586, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1788922, Length=152, Percent_Identity=36.1842105263158, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17533571, Length=680, Percent_Identity=42.6470588235294, Blast_Score=537, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17556745, Length=692, Percent_Identity=28.1791907514451, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI17506493, Length=824, Percent_Identity=25.2427184466019, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17557151, Length=155, Percent_Identity=37.4193548387097, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71988819, Length=134, Percent_Identity=31.3432835820896, Blast_Score=79, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71988811, Length=134, Percent_Identity=31.3432835820896, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17552882, Length=135, Percent_Identity=34.8148148148148, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=690, Percent_Identity=43.3333333333333, Blast_Score=579, Evalue=1e-166, Organism=Saccharomyces cerevisiae, GI6322359, Length=797, Percent_Identity=33.7515683814304, Blast_Score=400, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6324707, Length=799, Percent_Identity=24.7809762202753, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320593, Length=799, Percent_Identity=24.7809762202753, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6323320, Length=201, Percent_Identity=34.8258706467662, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=144, Percent_Identity=32.6388888888889, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582462, Length=694, Percent_Identity=44.0922190201729, Blast_Score=599, Evalue=1e-171, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=32.4137931034483, Blast_Score=360, Evalue=3e-99, Organism=Drosophila melanogaster, GI24585711, Length=487, Percent_Identity=23.6139630390144, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24585713, Length=487, Percent_Identity=23.6139630390144, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24585709, Length=487, Percent_Identity=23.6139630390144, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI78706572, Length=160, Percent_Identity=37.5, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=36.8794326241135, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI21357743, Length=135, Percent_Identity=31.8518518518519, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75778; Mature: 75647
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMDQERERG CCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ITITAAAISTSWQDHRINIIDTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVW EEEEEEEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RQADRYSVPRMVFVNKMDRTGADFLKVNKQIKERLKANAFPIQLPIGAEGDLTGIIDLVS HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHC NKAYLYKNDLGTDIEEAPIPDEMKDEALEWRSKLMESVAENDEELIEIFLDKGELTEDQL CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPNGKEDIRP HHHHHHHHHHHCCHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SDDNAPFSALAFKVMSDPYGKLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADER CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEECCCHHHHHHHHEEEEEECCCH EEVDELRAGDLGAVLGLKNTTTGDTLCTTDDPIVLETLFIPEPVISVAVEPKTKGDMEKL HHHHHHCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCHHEEEECCCCCCCHHHH SKALQALSEEDPTFRVSTDQETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR HHHHHHHCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ETIRSSSRGEGKYARQTGGKGQYGHVVIEMEPAEVGKGFEFVNKIVGGTVPKEYIGPASN HHHHCCCCCCCCHHHHCCCCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHCCCCCC GMKETCESGVLAGYPLIDVKVTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEP CHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHCC MMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQAKVPLAEMFGYATQLRSMTQ HHEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GRGIFSMEFANYEEVPRNVAEAIISKNQGNS CCCEEEEECCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMDQERERG CCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ITITAAAISTSWQDHRINIIDTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVW EEEEEEEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RQADRYSVPRMVFVNKMDRTGADFLKVNKQIKERLKANAFPIQLPIGAEGDLTGIIDLVS HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHC NKAYLYKNDLGTDIEEAPIPDEMKDEALEWRSKLMESVAENDEELIEIFLDKGELTEDQL CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPNGKEDIRP HHHHHHHHHHHCCHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SDDNAPFSALAFKVMSDPYGKLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADER CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEECCCHHHHHHHHEEEEEECCCH EEVDELRAGDLGAVLGLKNTTTGDTLCTTDDPIVLETLFIPEPVISVAVEPKTKGDMEKL HHHHHHCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCHHEEEECCCCCCCHHHH SKALQALSEEDPTFRVSTDQETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR HHHHHHHCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ETIRSSSRGEGKYARQTGGKGQYGHVVIEMEPAEVGKGFEFVNKIVGGTVPKEYIGPASN HHHHCCCCCCCCHHHHCCCCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHCCCCCC GMKETCESGVLAGYPLIDVKVTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEP CHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHCC MMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQAKVPLAEMFGYATQLRSMTQ HHEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GRGIFSMEFANYEEVPRNVAEAIISKNQGNS CCCEEEEECCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA