| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966916
Identifier: 123966916
GI number: 123966916
Start: 1480385
End: 1480903
Strand: Reverse
Name: 123966916
Synonym: P9515_16831
Alternate gene names: NA
Gene position: 1480903-1480385 (Counterclockwise)
Preceding gene: 123966918
Following gene: 123966913
Centisome position: 86.9
GC content: 32.95
Gene sequence:
>519_bases ATGCTTTTAGCTTTTGATGCTAAACAGAAACTTAAACTTTCTGTAACAAGGAATAAAGAATATCTTTCTAAATATCTTTT GGAAGAAGAAAGGGTTGTTGGAGCAATGCTGGACCCCAATAAATTGGAACCTGAAGGGGATGGGAAGTACAAGTATACTG TAACAAGTTTCAGGGTTTTTCAATTAGATGTTAACCCTGTTGTATCAATTGCAGTTGAGAATAAAGAAGGTATTTTAAAA ATGAGTGCACTTGACAGCAAATTAGATGGTTTAGGGATAATCGAAGATTTCAGTTTAATTTTGAAAGCAAATTTGGAGGC GACTGATAATGGATTAGAGGGCGAAGCACTTCTTGGTGTATCAGTAAGTCAACCTCCTCTTTTGAAACTTGTGCCAAAGA AAATTTTAGAATCTACTGGCCATTCAGTATTGAATGGAATTTTATTAGGAATAAAATCTAGAGTTCAGCAACAATTAATA AAAGATTTTGTAAATTGGTGTGATTTAAATAAGGTTTAA
Upstream 100 bases:
>100_bases TTTCTGCGTATGTCCCTTCAGGGCCCAAATATGCAACTTGTTTGCGCATGATTAATTGTAAAAAAAAAAGATCAATTAAG CATTGGAGGTATATAGAAAA
Downstream 100 bases:
>100_bases TTTAGTTAAAAAACTTTTCCTATGTAGATTCGTTACGCCATTAGCTTTAAGACTTAATAAATGCTCTTTAGTACCATAGC CTTTATTTTTAAAGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLLAFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDPNKLEPEGDGKYKYTVTSFRVFQLDVNPVVSIAVENKEGILK MSALDSKLDGLGIIEDFSLILKANLEATDNGLEGEALLGVSVSQPPLLKLVPKKILESTGHSVLNGILLGIKSRVQQQLI KDFVNWCDLNKV
Sequences:
>Translated_172_residues MLLAFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDPNKLEPEGDGKYKYTVTSFRVFQLDVNPVVSIAVENKEGILK MSALDSKLDGLGIIEDFSLILKANLEATDNGLEGEALLGVSVSQPPLLKLVPKKILESTGHSVLNGILLGIKSRVQQQLI KDFVNWCDLNKV >Mature_172_residues MLLAFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDPNKLEPEGDGKYKYTVTSFRVFQLDVNPVVSIAVENKEGILK MSALDSKLDGLGIIEDFSLILKANLEATDNGLEGEALLGVSVSQPPLLKLVPKKILESTGHSVLNGILLGIKSRVQQQLI KDFVNWCDLNKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018971 [H]
Pfam domain/function: PF09366 DUF1997 [H]
EC number: NA
Molecular weight: Translated: 19057; Mature: 19057
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDPNKLEPEGDGKYKYTVTSFRVF CEEEECCCCEEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEEEEEEE QLDVNPVVSIAVENKEGILKMSALDSKLDGLGIIEDFSLILKANLEATDNGLEGEALLGV EEECCCEEEEEEECCCCEEEEHHHCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEE SVSQPPLLKLVPKKILESTGHSVLNGILLGIKSRVQQQLIKDFVNWCDLNKV CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLAFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDPNKLEPEGDGKYKYTVTSFRVF CEEEECCCCEEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEEEEEEE QLDVNPVVSIAVENKEGILKMSALDSKLDGLGIIEDFSLILKANLEATDNGLEGEALLGV EEECCCEEEEEEECCCCEEEEHHHCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEE SVSQPPLLKLVPKKILESTGHSVLNGILLGIKSRVQQQLIKDFVNWCDLNKV CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1551590 [H]