| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is groES [H]
Identifier: 123966849
GI number: 123966849
Start: 1412763
End: 1413074
Strand: Reverse
Name: groES [H]
Synonym: P9515_16161
Alternate gene names: 123966849
Gene position: 1413074-1412763 (Counterclockwise)
Preceding gene: 123966852
Following gene: 123966848
Centisome position: 82.92
GC content: 42.63
Gene sequence:
>312_bases ATGGCAGCTGTTTCACTTACAGTCTCTACAGTCAAACCACTGGGAGATAGAATATTTATCAAAGTTTCCGAATCTGAGGA AAAAACTGCTGGGGGCATCCTTTTGCCTGACTCAGCTAAAGAAAAACCACAGGTAGGAGAAGTTGCTCAGGTTGGCCCTG GGAAACTTAACGATGATGGTTCTCGTCAAACTCCCGAAGTGAGTATTGGCGACAAAGTCTTATACAGCAAATATGCTGGA ACTGACATCAAATTGGGAGGAGATGAGTACGTCTTGCTTTCAGAAAAAGATATTTTGGCTGTTGTAAGCTAA
Upstream 100 bases:
>100_bases TTGCTGCTTAACAGATTATGTTATTGATCATACGGTATTGATTAACAATCTTTCCAAATTTTTGACGCATAGCGTCGCAT TTATGACCCTCCATTAATCT
Downstream 100 bases:
>100_bases TTTATTTGTTTCAAAAATTATTAAAACTTATTATTAAATTACTTGCCTAACATGGCTAAAAGAATTATTTACAACGAGCA AGCTCGTAGAGCGCTCGAGA
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAG TDIKLGGDEYVLLSEKDILAVVS
Sequences:
>Translated_103_residues MAAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAG TDIKLGGDEYVLLSEKDILAVVS >Mature_102_residues AAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGT DIKLGGDEYVLLSEKDILAVVS
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=39.3617021276596, Blast_Score=68, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17555568, Length=99, Percent_Identity=35.3535353535354, Blast_Score=61, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324594, Length=104, Percent_Identity=35.5769230769231, Blast_Score=74, Evalue=4e-15, Organism=Drosophila melanogaster, GI21358317, Length=99, Percent_Identity=43.4343434343434, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI21356029, Length=103, Percent_Identity=41.747572815534, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10819; Mature: 10688
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDG CCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCC SRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVVS CCCCCCEECCCEEEEEECCCCEEEECCCCEEEEECCCEEEEEC >Mature Secondary Structure AAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDG CEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCC SRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVVS CCCCCCEECCCEEEEEECCCCEEEECCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA