| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123966766
Identifier: 123966766
GI number: 123966766
Start: 1360741
End: 1361274
Strand: Reverse
Name: 123966766
Synonym: P9515_15331
Alternate gene names: NA
Gene position: 1361274-1360741 (Counterclockwise)
Preceding gene: 123966767
Following gene: 123966765
Centisome position: 79.88
GC content: 24.53
Gene sequence:
>534_bases TTGAAAAATCTTTTCATTGAAAGAAGTTGCCTAATAAGCACAAATAGAGAATATAGATGGAGTTTAAGTTTCAAATTAAC TAAATCCATAAAAGAGATAATTTTCATAGGTCTAAATCCATCTCTTTCAGATACGAATTACATTGATAATACAACAAGAA AAATAATCAAAATTTGCAAAAACAATAATTATGGCAATCTTAAAATAATAAATTTATTTGCCTTGATTGCCAAAAATCCT CATGAATTATTAATCCATCAAAAACCCATTGGATATTTAAATAATAAGTTCATAAATAAAAATTTAAAATATTGGTCTGA AAATAAAAATTGTCATTTGTGGTTGGGCTGGGGTAACAACGGGATCTACTTTAATAGGAATAACAAAATTTCTAAAAAAA TATCAAATTCTTATTCAATTAAAAAAGATAAATTTAATAATCCTTTAGGCCCCCTTTTTATAAAAAAAACAAAAAAGCAA AATCCCATACACCCTTTATATTGTTCTGATAATTCTGTTCTAAAAGCAAAATAG
Upstream 100 bases:
>100_bases AACTTGTAAAAAGATTTAGATTCATCATTACAACTGAATTAGTTGGTTTTGCAACTATCCCAATTTTTGCAACCTTAATG GCTAGGGGTGTGGGGCTTGT
Downstream 100 bases:
>100_bases TCATTTAATTTCTCGTAAGGTAAAAAACTAATGCTTTTGTTTAAAAAGTATGTTAATTTTTAAAAATATACTTAAATCTG AGATGAAAATCTCTAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKNLFIERSCLISTNREYRWSLSFKLTKSIKEIIFIGLNPSLSDTNYIDNTTRKIIKICKNNNYGNLKIINLFALIAKNP HELLIHQKPIGYLNNKFINKNLKYWSENKNCHLWLGWGNNGIYFNRNNKISKKISNSYSIKKDKFNNPLGPLFIKKTKKQ NPIHPLYCSDNSVLKAK
Sequences:
>Translated_177_residues MKNLFIERSCLISTNREYRWSLSFKLTKSIKEIIFIGLNPSLSDTNYIDNTTRKIIKICKNNNYGNLKIINLFALIAKNP HELLIHQKPIGYLNNKFINKNLKYWSENKNCHLWLGWGNNGIYFNRNNKISKKISNSYSIKKDKFNNPLGPLFIKKTKKQ NPIHPLYCSDNSVLKAK >Mature_177_residues MKNLFIERSCLISTNREYRWSLSFKLTKSIKEIIFIGLNPSLSDTNYIDNTTRKIIKICKNNNYGNLKIINLFALIAKNP HELLIHQKPIGYLNNKFINKNLKYWSENKNCHLWLGWGNNGIYFNRNNKISKKISNSYSIKKDKFNNPLGPLFIKKTKKQ NPIHPLYCSDNSVLKAK
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20752; Mature: 20752
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLFIERSCLISTNREYRWSLSFKLTKSIKEIIFIGLNPSLSDTNYIDNTTRKIIKICK CCCEEEECEEEEECCCCEEEEEEEEEHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC NNNYGNLKIINLFALIAKNPHELLIHQKPIGYLNNKFINKNLKYWSENKNCHLWLGWGNN CCCCCCEEEEEEEEEHHCCCHHEEEEECCCCCCCCCEECCCCEEECCCCCEEEEEEECCC GIYFNRNNKISKKISNSYSIKKDKFNNPLGPLFIKKTKKQNPIHPLYCSDNSVLKAK EEEECCCCCHHHHHCCCCCEECCCCCCCCCCEEEEECCCCCCCCEEEECCCCEEECC >Mature Secondary Structure MKNLFIERSCLISTNREYRWSLSFKLTKSIKEIIFIGLNPSLSDTNYIDNTTRKIIKICK CCCEEEECEEEEECCCCEEEEEEEEEHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC NNNYGNLKIINLFALIAKNPHELLIHQKPIGYLNNKFINKNLKYWSENKNCHLWLGWGNN CCCCCCEEEEEEEEEHHCCCHHEEEEECCCCCCCCCEECCCCEEECCCCCEEEEEEECCC GIYFNRNNKISKKISNSYSIKKDKFNNPLGPLFIKKTKKQNPIHPLYCSDNSVLKAK EEEECCCCCHHHHHCCCCCEECCCCCCCCCCEEEEECCCCCCCCEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA