Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966765

Identifier: 123966765

GI number: 123966765

Start: 1360530

End: 1360691

Strand: Reverse

Name: 123966765

Synonym: P9515_15321

Alternate gene names: NA

Gene position: 1360691-1360530 (Counterclockwise)

Preceding gene: 123966766

Following gene: 123966764

Centisome position: 79.84

GC content: 20.99

Gene sequence:

>162_bases
ATGTTAATTTTTAAAAATATACTTAAATCTGAGATGAAAATCTCTAAACAATTAAAAAAATTAAAGAATTTAAACGTTGA
AGCAGAAAACTGTTTAACGAGAGATGAGGCAAAAAAAATTATTAATAAAGCAATTAAGGCTCAAAGTAAAATAACTTTTT
AA

Upstream 100 bases:

>100_bases
CCCATACACCCTTTATATTGTTCTGATAATTCTGTTCTAAAAGCAAAATAGTCATTTAATTTCTCGTAAGGTAAAAAACT
AATGCTTTTGTTTAAAAAGT

Downstream 100 bases:

>100_bases
AATAATTTTTATTTGGTTTTAATTTCTATCTCTCTGATCAATTGCACTTCTACTTAAAGATAAATAAAAAGTGTCTAAGA
CATTAAAACTTATTGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MLIFKNILKSEMKISKQLKKLKNLNVEAENCLTRDEAKKIINKAIKAQSKITF

Sequences:

>Translated_53_residues
MLIFKNILKSEMKISKQLKKLKNLNVEAENCLTRDEAKKIINKAIKAQSKITF
>Mature_53_residues
MLIFKNILKSEMKISKQLKKLKNLNVEAENCLTRDEAKKIINKAIKAQSKITF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6149; Mature: 6149

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIFKNILKSEMKISKQLKKLKNLNVEAENCLTRDEAKKIINKAIKAQSKITF
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLIFKNILKSEMKISKQLKKLKNLNVEAENCLTRDEAKKIINKAIKAQSKITF
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA