| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is plsY
Identifier: 123966721
GI number: 123966721
Start: 1323613
End: 1324209
Strand: Direct
Name: plsY
Synonym: P9515_14881
Alternate gene names: 123966721
Gene position: 1323613-1324209 (Clockwise)
Preceding gene: 123966720
Following gene: 123966725
Centisome position: 77.67
GC content: 31.16
Gene sequence:
>597_bases ATGACAATTATTATTATCGTTCTCAGTTATTTTTTAGGATCAATTCCAACAGGATTTTTATTTGGAAAATTTCTAAAAAA TATAGATTTAAGACTTATTGGGTCTGGATCTACAGGAGCAACTAATGTTTTAAGAAACGTGGGCAAATGGCCTGCTTTTT TCGTTTTTATTATTGATGTAGGCAAAGGTCTTCTTGCGGTGAAACTTTCTCAAAGTTATACAAATCAACACTTATTTGAA GTTTTGGCAGGAATTTCTGCTGTTTCCGGACATATATGGCCAATATGGTTAAAAGGAAAAGGTGGTAAGGCTGTAGCCAC TGGATTAGGAATGTTTATCGCTCTTTCATGGAAGGTAGGATTTGCATCTTTGGGAATTTTTTTAATAATTCTTTCAAAAT CTAAGATAGTCTCTTTATCAAGTATTTTAGCTGCATTTTTTTTACCGCTTTTCATGTTTTTGGATATCGGAGTAACTAAT CATCCTTACTTCTTAATTAGTTTAGTTGTATCAATATTAGTTATTTTGAAGCATAGAACAAATATCAGACGTCTTATTAA AGGAGAAGAATCAAAGATTAATAGCCTTAATAAATAG
Upstream 100 bases:
>100_bases AAACATCTGTAGAAATTCCAATTCTTCAATTTCCATTATGGCTTGCCTTTGAGGGCTCAAATGATGAAATATATGATGAT CTAGAACTAAACTAAAATCT
Downstream 100 bases:
>100_bases AATTACAGATATCTAAAAAAACCTTATTAGGATCTTTAGCTTTTGAAATAGCTCTTCCAATAACCAATCTAGAAGCTCCA TTTTTTAACGCTTCATAGGG
Product: membrane protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTIIIIVLSYFLGSIPTGFLFGKFLKNIDLRLIGSGSTGATNVLRNVGKWPAFFVFIIDVGKGLLAVKLSQSYTNQHLFE VLAGISAVSGHIWPIWLKGKGGKAVATGLGMFIALSWKVGFASLGIFLIILSKSKIVSLSSILAAFFLPLFMFLDIGVTN HPYFLISLVVSILVILKHRTNIRRLIKGEESKINSLNK
Sequences:
>Translated_198_residues MTIIIIVLSYFLGSIPTGFLFGKFLKNIDLRLIGSGSTGATNVLRNVGKWPAFFVFIIDVGKGLLAVKLSQSYTNQHLFE VLAGISAVSGHIWPIWLKGKGGKAVATGLGMFIALSWKVGFASLGIFLIILSKSKIVSLSSILAAFFLPLFMFLDIGVTN HPYFLISLVVSILVILKHRTNIRRLIKGEESKINSLNK >Mature_197_residues TIIIIVLSYFLGSIPTGFLFGKFLKNIDLRLIGSGSTGATNVLRNVGKWPAFFVFIIDVGKGLLAVKLSQSYTNQHLFEV LAGISAVSGHIWPIWLKGKGGKAVATGLGMFIALSWKVGFASLGIFLIILSKSKIVSLSSILAAFFLPLFMFLDIGVTNH PYFLISLVVSILVILKHRTNIRRLIKGEESKINSLNK
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=190, Percent_Identity=35.2631578947368, Blast_Score=100, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_PROM5 (A2BY34)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001011802.1 - STRING: A2BY34 - GeneID: 4720052 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_14881 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: VLGWKAG - ProtClustDB: PRK14419 - BioCyc: PMAR167542:P9515ORF_1557-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 21624; Mature: 21493
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18ddab28)-; HASH(0x1abde0c8)-; HASH(0x1ac038dc)-; HASH(0x1ac014cc)-; HASH(0x1ac066c4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIIIVLSYFLGSIPTGFLFGKFLKNIDLRLIGSGSTGATNVLRNVGKWPAFFVFIIDV CEEHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHEEC GKGLLAVKLSQSYTNQHLFEVLAGISAVSGHIWPIWLKGKGGKAVATGLGMFIALSWKVG CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHEEHHHH FASLGIFLIILSKSKIVSLSSILAAFFLPLFMFLDIGVTNHPYFLISLVVSILVILKHRT HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCH NIRRLIKGEESKINSLNK HHHHHHCCCHHHHCCCCH >Mature Secondary Structure TIIIIVLSYFLGSIPTGFLFGKFLKNIDLRLIGSGSTGATNVLRNVGKWPAFFVFIIDV EEHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHEEC GKGLLAVKLSQSYTNQHLFEVLAGISAVSGHIWPIWLKGKGGKAVATGLGMFIALSWKVG CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHEEHHHH FASLGIFLIILSKSKIVSLSSILAAFFLPLFMFLDIGVTNHPYFLISLVVSILVILKHRT HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCH NIRRLIKGEESKINSLNK HHHHHHCCCHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA