| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966720
Identifier: 123966720
GI number: 123966720
Start: 1322597
End: 1323607
Strand: Direct
Name: 123966720
Synonym: P9515_14871
Alternate gene names: NA
Gene position: 1322597-1323607 (Clockwise)
Preceding gene: 123966719
Following gene: 123966721
Centisome position: 77.61
GC content: 31.65
Gene sequence:
>1011_bases ATGACTAATACCAAAGTTTCTAATAATAATCCTGAAAAGGAACCAATAATTAATAAATCGATTACAAAAACAAATGCTGA TCCAAATATCAAAAATAAAACGACTCAAAGTAGAAAGGTTGATTCGGTAAGCAAAAAAAGCAATAAATCTCTAGATGATA TTTCTAATGAAATCTTTAGCGAGCTTATTTCAAAAAAAATCTCTTTACTTAGAGAAATAAAAGAGTTAGAAACAAAAAAA AATGAATTAGACAAAGAAATAGAATCAAATTTTAAGGGGCAATCAGATAATATAGCCAAAAGAGTAAAGGGATTCCAAGA ATATTTAACCGGCTCTTTACAGAACCTCTCACAAAATGTTGAAAAACTGGAATTAGTATCACAACCGATAGTTGTTAAGC CTTCTCCTCTTGATGAGAAAAAAGAAGTTTCAAACAAAAATGAATTTATTAGTATTCCTGCTTTATCTGAAACATTTAAA CCCGATGAAAAAATAATTAGAAATTGTTTATCAACTTTTACTGAACAGCCTGATTTTTATTCAGAACCTTGGAAATTAAG ACGAAGCCTTGATTCCTCAGATATAGAAGTAATGAACGATTGGTTCTTTAATATGGGTGGGAGAGGTTCATTAGAAAGTA GAGGTTCAAGACAAAAAAATGCTTTATTGTCTGCTGGATTAATAGCTATTCTTGGTGAATTATATGGCGATCAGTTTCAG ACTTTAATTTTAGCTTCTGAACCTGAAAGATTAGGAGAATGGAGAAGAATTTTACAAGATTCCTTGGGTCTTACAAGAGA TGATTTTGGACCTAATAGTGGCATTGTCCTTTTTGAGAGGTCTGAAGGCGTTATTGAAAGAGCTGATAGATTAGAGGCCA ATGAGGAATTACCATTCATTATTGTCGATGCCGCTGAAACATCTGTAGAAATTCCAATTCTTCAATTTCCATTATGGCTT GCCTTTGAGGGCTCAAATGATGAAATATATGATGATCTAGAACTAAACTAA
Upstream 100 bases:
>100_bases AATCCACAACAATTAAAAAGTGAACTTATAAAGAAAGTTGAATCTCTGGAAATTAAAAACCTTGAAAACTAAATTTTTGA TTAAACACCATTTTATTTAA
Downstream 100 bases:
>100_bases AATCTATGACAATTATTATTATCGTTCTCAGTTATTTTTTAGGATCAATTCCAACAGGATTTTTATTTGGAAAATTTCTA AAAAATATAGATTTAAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTNTKVSNNNPEKEPIINKSITKTNADPNIKNKTTQSRKVDSVSKKSNKSLDDISNEIFSELISKKISLLREIKELETKK NELDKEIESNFKGQSDNIAKRVKGFQEYLTGSLQNLSQNVEKLELVSQPIVVKPSPLDEKKEVSNKNEFISIPALSETFK PDEKIIRNCLSTFTEQPDFYSEPWKLRRSLDSSDIEVMNDWFFNMGGRGSLESRGSRQKNALLSAGLIAILGELYGDQFQ TLILASEPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERSEGVIERADRLEANEELPFIIVDAAETSVEIPILQFPLWL AFEGSNDEIYDDLELN
Sequences:
>Translated_336_residues MTNTKVSNNNPEKEPIINKSITKTNADPNIKNKTTQSRKVDSVSKKSNKSLDDISNEIFSELISKKISLLREIKELETKK NELDKEIESNFKGQSDNIAKRVKGFQEYLTGSLQNLSQNVEKLELVSQPIVVKPSPLDEKKEVSNKNEFISIPALSETFK PDEKIIRNCLSTFTEQPDFYSEPWKLRRSLDSSDIEVMNDWFFNMGGRGSLESRGSRQKNALLSAGLIAILGELYGDQFQ TLILASEPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERSEGVIERADRLEANEELPFIIVDAAETSVEIPILQFPLWL AFEGSNDEIYDDLELN >Mature_335_residues TNTKVSNNNPEKEPIINKSITKTNADPNIKNKTTQSRKVDSVSKKSNKSLDDISNEIFSELISKKISLLREIKELETKKN ELDKEIESNFKGQSDNIAKRVKGFQEYLTGSLQNLSQNVEKLELVSQPIVVKPSPLDEKKEVSNKNEFISIPALSETFKP DEKIIRNCLSTFTEQPDFYSEPWKLRRSLDSSDIEVMNDWFFNMGGRGSLESRGSRQKNALLSAGLIAILGELYGDQFQT LILASEPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERSEGVIERADRLEANEELPFIIVDAAETSVEIPILQFPLWLA FEGSNDEIYDDLELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38108; Mature: 37977
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKVSNNNPEKEPIINKSITKTNADPNIKNKTTQSRKVDSVSKKSNKSLDDISNEIFS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH ELISKKISLLREIKELETKKNELDKEIESNFKGQSDNIAKRVKGFQEYLTGSLQNLSQNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKLELVSQPIVVKPSPLDEKKEVSNKNEFISIPALSETFKPDEKIIRNCLSTFTEQPDFY HHHHHHCCCEEECCCCCCHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCC SEPWKLRRSLDSSDIEVMNDWFFNMGGRGSLESRGSRQKNALLSAGLIAILGELYGDQFQ CCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHE TLILASEPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERSEGVIERADRLEANEELPFI EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEE IVDAAETSVEIPILQFPLWLAFEGSNDEIYDDLELN EEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TNTKVSNNNPEKEPIINKSITKTNADPNIKNKTTQSRKVDSVSKKSNKSLDDISNEIFS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH ELISKKISLLREIKELETKKNELDKEIESNFKGQSDNIAKRVKGFQEYLTGSLQNLSQNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKLELVSQPIVVKPSPLDEKKEVSNKNEFISIPALSETFKPDEKIIRNCLSTFTEQPDFY HHHHHHCCCEEECCCCCCHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCC SEPWKLRRSLDSSDIEVMNDWFFNMGGRGSLESRGSRQKNALLSAGLIAILGELYGDQFQ CCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHE TLILASEPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERSEGVIERADRLEANEELPFI EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEE IVDAAETSVEIPILQFPLWLAFEGSNDEIYDDLELN EEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA