| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is folC [H]
Identifier: 123966696
GI number: 123966696
Start: 1299472
End: 1300704
Strand: Direct
Name: folC [H]
Synonym: P9515_14631
Alternate gene names: 123966696
Gene position: 1299472-1300704 (Clockwise)
Preceding gene: 123966695
Following gene: 123966699
Centisome position: 76.25
GC content: 29.93
Gene sequence:
>1233_bases TTGAAAAAAGAAAACTTTAAGAATTTTGATTTGCTTTCACCTAAATTTGAGAGACAAAATATTCACTTAGGATTATCAAG AATTAAAAAAGCGCTTAAGAAATTAAATGATCCTTGCAAAAACATCCCAGCTATTCAAGTTGTTGGAACAAATGGGAAAG GTTCGATTACTGCTTTTATAGAAAATATTCTTTATGAAGAGAAAAAGAATATTGGGGTTACCACTTCGCCTCACCTTTTA GATATATGTGAAAGGATCAGAGTGAATAAAGAAAATATTCATAAAGAAGAATTTGAGAGCTTATTTAAGAAAATTGCAAC TTATCTTTCAATCTATAAATTATCCCCTTTTGAACAGATTATTTGCTGTGCACTAGTTTTTTTTGATATGAAAAAAGTCG ATTTATTGATACTTGAAGCTGGTTTAGGTGGAAGATTAGATGCAACTACAGCTCATAATCTAAGACCAATAATTGCCATT GGAAATATAGATTTAGACCACAAAGAGTATCTTGGAGATTCGATAGAAAAAATTACCAAGGAAAAAGTTGCTGTAATTGA AAAAAATGCATTTGTTATTTCTTTTCGTCAAAAAACTAAAGTTGAGGAAATAATTAAAGCAAGAGCCAAAAAAGTAGGTG CACAAATCATATGGAAGGAATCACTATCTAATGAAATTGAACTTGGTTTAAATGGAGCTTTTCAAAGACAAAATGCCGCA GTTGCTATTGGAGTAATTGAGGCACTAAATAATTTAGGGTTCAATGTCAGAGAATGTTCCATTAAGGAAGGACTTAAGAA CACAAAATGGAATGGGAGGTTAGAAATAATTAATTGTTTAAATAAAAAGATACTTGTCGATTCTGCACATAATTACTCTG CGGCAATGGCTCTTTCAGAGGAAAGAAAAACTTGGAATAATCAAGAGGAAGGTGTCTATTGGATTTTAGGGGTCCAAAAA AGTAAAGACATTGTATCTATGCTAAAAGTTCTTATTAAAAAAAATGATCACATATTATTAGTTCCTGTTCCTAATCAAAC TTGTTGGAGATTAGAGGATCTTTTAGATAATGCTGAACTTGAAAATTTAAATATAATAGATTTTGAAAAAATTGATTATG CTTTTAATTATCTTTTGGAACTTAGAACATGGCCAAAATGTCATCCCGTACTAACTGGCTCAATTTTTTTAGTCTCTGAG TTTATTAAATTCGCAAATAATCAAAATTATTAA
Upstream 100 bases:
>100_bases GGTTAGGTTTGTTCCACCATTGATAATTTCGCGAAATGAAATCAAAATACTTCTTAAGAAGTTGAATTTAATTTTTGAAG AACTGTAAGCTTTAGAGGAT
Downstream 100 bases:
>100_bases AGATTAAAGTCATCTTTTATTTCCCATCCTTCCAATTTCCCAGGATTTAACAACCCTTTAGGATCGAATTTTAATTTTGC TTTTACTTGATCAGAATCAA
Product: putative bifunctional dihydrofolate/folylpolyglutamate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKKENFKNFDLLSPKFERQNIHLGLSRIKKALKKLNDPCKNIPAIQVVGTNGKGSITAFIENILYEEKKNIGVTTSPHLL DICERIRVNKENIHKEEFESLFKKIATYLSIYKLSPFEQIICCALVFFDMKKVDLLILEAGLGGRLDATTAHNLRPIIAI GNIDLDHKEYLGDSIEKITKEKVAVIEKNAFVISFRQKTKVEEIIKARAKKVGAQIIWKESLSNEIELGLNGAFQRQNAA VAIGVIEALNNLGFNVRECSIKEGLKNTKWNGRLEIINCLNKKILVDSAHNYSAAMALSEERKTWNNQEEGVYWILGVQK SKDIVSMLKVLIKKNDHILLVPVPNQTCWRLEDLLDNAELENLNIIDFEKIDYAFNYLLELRTWPKCHPVLTGSIFLVSE FIKFANNQNY
Sequences:
>Translated_410_residues MKKENFKNFDLLSPKFERQNIHLGLSRIKKALKKLNDPCKNIPAIQVVGTNGKGSITAFIENILYEEKKNIGVTTSPHLL DICERIRVNKENIHKEEFESLFKKIATYLSIYKLSPFEQIICCALVFFDMKKVDLLILEAGLGGRLDATTAHNLRPIIAI GNIDLDHKEYLGDSIEKITKEKVAVIEKNAFVISFRQKTKVEEIIKARAKKVGAQIIWKESLSNEIELGLNGAFQRQNAA VAIGVIEALNNLGFNVRECSIKEGLKNTKWNGRLEIINCLNKKILVDSAHNYSAAMALSEERKTWNNQEEGVYWILGVQK SKDIVSMLKVLIKKNDHILLVPVPNQTCWRLEDLLDNAELENLNIIDFEKIDYAFNYLLELRTWPKCHPVLTGSIFLVSE FIKFANNQNY >Mature_410_residues MKKENFKNFDLLSPKFERQNIHLGLSRIKKALKKLNDPCKNIPAIQVVGTNGKGSITAFIENILYEEKKNIGVTTSPHLL DICERIRVNKENIHKEEFESLFKKIATYLSIYKLSPFEQIICCALVFFDMKKVDLLILEAGLGGRLDATTAHNLRPIIAI GNIDLDHKEYLGDSIEKITKEKVAVIEKNAFVISFRQKTKVEEIIKARAKKVGAQIIWKESLSNEIELGLNGAFQRQNAA VAIGVIEALNNLGFNVRECSIKEGLKNTKWNGRLEIINCLNKKILVDSAHNYSAAMALSEERKTWNNQEEGVYWILGVQK SKDIVSMLKVLIKKNDHILLVPVPNQTCWRLEDLLDNAELENLNIIDFEKIDYAFNYLLELRTWPKCHPVLTGSIFLVSE FIKFANNQNY
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=289, Percent_Identity=28.0276816608997, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI66932984, Length=289, Percent_Identity=28.0276816608997, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1788654, Length=358, Percent_Identity=26.8156424581006, Blast_Score=116, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17553148, Length=378, Percent_Identity=27.2486772486773, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71984923, Length=378, Percent_Identity=27.2486772486773, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17553150, Length=378, Percent_Identity=27.2486772486773, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323760, Length=430, Percent_Identity=26.7441860465116, Blast_Score=149, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6324815, Length=293, Percent_Identity=30.3754266211604, Blast_Score=103, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6322718, Length=428, Percent_Identity=24.2990654205607, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581568, Length=194, Percent_Identity=31.9587628865979, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24641571, Length=274, Percent_Identity=27.3722627737226, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 46785; Mature: 46785
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKENFKNFDLLSPKFERQNIHLGLSRIKKALKKLNDPCKNIPAIQVVGTNGKGSITAFI CCCCCCCCCCCCCCCCCCCHHEECHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHH ENILYEEKKNIGVTTSPHLLDICERIRVNKENIHKEEFESLFKKIATYLSIYKLSPFEQI HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH ICCALVFFDMKKVDLLILEAGLGGRLDATTAHNLRPIIAIGNIDLDHKEYLGDSIEKITK HHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH EKVAVIEKNAFVISFRQKTKVEEIIKARAKKVGAQIIWKESLSNEIELGLNGAFQRQNAA HHHHEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCEEECCCCCCCCCCCE VAIGVIEALNNLGFNVRECSIKEGLKNTKWNGRLEIINCLNKKILVDSAHNYSAAMALSE EEHHHHHHHHHCCCCEEECHHHHCCCCCCCCCEEHHHHHCCCEEEEECCCCCHHHHHHHH ERKTWNNQEEGVYWILGVQKSKDIVSMLKVLIKKNDHILLVPVPNQTCWRLEDLLDNAEL HHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCC ENLNIIDFEKIDYAFNYLLELRTWPKCHPVLTGSIFLVSEFIKFANNQNY CCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKENFKNFDLLSPKFERQNIHLGLSRIKKALKKLNDPCKNIPAIQVVGTNGKGSITAFI CCCCCCCCCCCCCCCCCCCHHEECHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHH ENILYEEKKNIGVTTSPHLLDICERIRVNKENIHKEEFESLFKKIATYLSIYKLSPFEQI HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH ICCALVFFDMKKVDLLILEAGLGGRLDATTAHNLRPIIAIGNIDLDHKEYLGDSIEKITK HHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH EKVAVIEKNAFVISFRQKTKVEEIIKARAKKVGAQIIWKESLSNEIELGLNGAFQRQNAA HHHHEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCEEECCCCCCCCCCCE VAIGVIEALNNLGFNVRECSIKEGLKNTKWNGRLEIINCLNKKILVDSAHNYSAAMALSE EEHHHHHHHHHCCCCEEECHHHHCCCCCCCCCEEHHHHHCCCEEEEECCCCCHHHHHHHH ERKTWNNQEEGVYWILGVQKSKDIVSMLKVLIKKNDHILLVPVPNQTCWRLEDLLDNAEL HHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCC ENLNIIDFEKIDYAFNYLLELRTWPKCHPVLTGSIFLVSEFIKFANNQNY CCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]