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The map label for this gene is yfbG [C]

Identifier: 123966655

GI number: 123966655

Start: 1260504

End: 1261439

Strand: Direct

Name: yfbG [C]

Synonym: P9515_14221

Alternate gene names: 123966655

Gene position: 1260504-1261439 (Clockwise)

Preceding gene: 123966653

Following gene: 123966662

Centisome position: 73.97

GC content: 30.13

Gene sequence:

>936_bases
ATGATTAAAAAAAATAGAAATTTAATTACTGGTGGGAGTGGTTTTCTCGGCTCACATCTTGCTAACAATTTGCTTAAAAA
AGGAGAAGAAGTAATATGTCTCGATAATTTTTTTACAGGTACAAAGAAAAATATACATCATTTGTTAAAAGATCCGAATT
TCGAATTAATCAGACATGATGTCACTGAACCAATAAAATTAGAGGTAGACAAAATATGGCATTTAGCTTGTCCAGCCTCA
CCTATTCATTATCAGTTTAATCCTATTAAAACCACCAAGACAAGTTTTATGGGAACTTATAATATGTTGGGATTAGCAAA
ACGAATAGGAGCAAAGATTTTATTAGCAAGCACAAGTGAAGTTTATGGTGATCCTTTAGAACATCCACAAACTGAGTCAT
ATAGAGGTTCAGTGAATACTACAGGTATTAGAAGTTGTTATGACGAAGGTAAAAGAGTAGCTGAAACATTATGTTCTGAT
TATCAAAGAATACATGGAGTTGATGTAAGAATTATGCGGATATTTAATACTTATGGTCCAAATATGAGATCTGATGACGG
AAGAGTTGTAAGTAACTTTATTAAACAAGCTCTTAAAAATGAGAAAATAACTCTTTATGGTGAAGGTAAACAAACTAGAT
CTTTTTGTTATGTTGATGATTTAATAAATGGGATGATACTTTTAATGGAAAGTGATTTTCAAAGCCCAATAAATATTGGC
AATCCAAATGAATTTTCAATAAGAGAATTGGCTGATATAGTAAGAGATTTAATAAATCCCAACTTAGAATATGAATTTAA
AGAAATGCCTAAAGATGATCCAAAACAACGCAAACCATCCATTTCACTAGCTAAAAGTATCTTAAACTGGGAGCCTAAAG
TTGAATTAAAAGAAGGGCTTTTAAAAACAATAGAATGGTTTAAATATAATTTATAA

Upstream 100 bases:

>100_bases
AGTTTCATTAATATTAAAATACATGAGAAGAAAATAATAATTACAAAAATATATATTAATAACTTAAGATAAAGACTCGT
CAGTTATATAATTCTTTTTG

Downstream 100 bases:

>100_bases
AAAATTTGATTAGTTAATTATGATTTTTAAAATTTAAATTTTTCTCCAAACAGCTAAAAGTTTTCCCTGAAAAACAACTT
GGTCTAGGTTCAATTCAATT

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIKKNRNLITGGSGFLGSHLANNLLKKGEEVICLDNFFTGTKKNIHHLLKDPNFELIRHDVTEPIKLEVDKIWHLACPAS
PIHYQFNPIKTTKTSFMGTYNMLGLAKRIGAKILLASTSEVYGDPLEHPQTESYRGSVNTTGIRSCYDEGKRVAETLCSD
YQRIHGVDVRIMRIFNTYGPNMRSDDGRVVSNFIKQALKNEKITLYGEGKQTRSFCYVDDLINGMILLMESDFQSPINIG
NPNEFSIRELADIVRDLINPNLEYEFKEMPKDDPKQRKPSISLAKSILNWEPKVELKEGLLKTIEWFKYNL

Sequences:

>Translated_311_residues
MIKKNRNLITGGSGFLGSHLANNLLKKGEEVICLDNFFTGTKKNIHHLLKDPNFELIRHDVTEPIKLEVDKIWHLACPAS
PIHYQFNPIKTTKTSFMGTYNMLGLAKRIGAKILLASTSEVYGDPLEHPQTESYRGSVNTTGIRSCYDEGKRVAETLCSD
YQRIHGVDVRIMRIFNTYGPNMRSDDGRVVSNFIKQALKNEKITLYGEGKQTRSFCYVDDLINGMILLMESDFQSPINIG
NPNEFSIRELADIVRDLINPNLEYEFKEMPKDDPKQRKPSISLAKSILNWEPKVELKEGLLKTIEWFKYNL
>Mature_311_residues
MIKKNRNLITGGSGFLGSHLANNLLKKGEEVICLDNFFTGTKKNIHHLLKDPNFELIRHDVTEPIKLEVDKIWHLACPAS
PIHYQFNPIKTTKTSFMGTYNMLGLAKRIGAKILLASTSEVYGDPLEHPQTESYRGSVNTTGIRSCYDEGKRVAETLCSD
YQRIHGVDVRIMRIFNTYGPNMRSDDGRVVSNFIKQALKNEKITLYGEGKQTRSFCYVDDLINGMILLMESDFQSPINIG
NPNEFSIRELADIVRDLINPNLEYEFKEMPKDDPKQRKPSISLAKSILNWEPKVELKEGLLKTIEWFKYNL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=308, Percent_Identity=57.7922077922078, Blast_Score=385, Evalue=1e-107,
Organism=Homo sapiens, GI7657641, Length=326, Percent_Identity=28.5276073619632, Blast_Score=108, Evalue=9e-24,
Organism=Escherichia coli, GI1788589, Length=342, Percent_Identity=28.3625730994152, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788353, Length=337, Percent_Identity=24.6290801186944, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI48994969, Length=336, Percent_Identity=22.6190476190476, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786974, Length=334, Percent_Identity=24.251497005988, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788365, Length=329, Percent_Identity=23.1003039513678, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=307, Percent_Identity=57.0032573289902, Blast_Score=373, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI115532424, Length=321, Percent_Identity=24.6105919003115, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17568069, Length=325, Percent_Identity=25.5384615384615, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21356223, Length=309, Percent_Identity=58.252427184466, Blast_Score=384, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35546; Mature: 35546

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKNRNLITGGSGFLGSHLANNLLKKGEEVICLDNFFTGTKKNIHHLLKDPNFELIRHD
CCCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHC
VTEPIKLEVDKIWHLACPASPIHYQFNPIKTTKTSFMGTYNMLGLAKRIGAKILLASTSE
CCCCCEEEHHHEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHH
VYGDPLEHPQTESYRGSVNTTGIRSCYDEGKRVAETLCSDYQRIHGVDVRIMRIFNTYGP
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
NMRSDDGRVVSNFIKQALKNEKITLYGEGKQTRSFCYVDDLINGMILLMESDFQSPINIG
CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHCCEEEEEECCCCCCCCCC
NPNEFSIRELADIVRDLINPNLEYEFKEMPKDDPKQRKPSISLAKSILNWEPKVELKEGL
CCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHH
LKTIEWFKYNL
HHHHHHHHCCC
>Mature Secondary Structure
MIKKNRNLITGGSGFLGSHLANNLLKKGEEVICLDNFFTGTKKNIHHLLKDPNFELIRHD
CCCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHC
VTEPIKLEVDKIWHLACPASPIHYQFNPIKTTKTSFMGTYNMLGLAKRIGAKILLASTSE
CCCCCEEEHHHEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHH
VYGDPLEHPQTESYRGSVNTTGIRSCYDEGKRVAETLCSDYQRIHGVDVRIMRIFNTYGP
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
NMRSDDGRVVSNFIKQALKNEKITLYGEGKQTRSFCYVDDLINGMILLMESDFQSPINIG
CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHCCEEEEEECCCCCCCCCC
NPNEFSIRELADIVRDLINPNLEYEFKEMPKDDPKQRKPSISLAKSILNWEPKVELKEGL
CCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHH
LKTIEWFKYNL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]