| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is yjjG [C]
Identifier: 123966639
GI number: 123966639
Start: 1244901
End: 1245647
Strand: Direct
Name: yjjG [C]
Synonym: P9515_14061
Alternate gene names: 123966639
Gene position: 1244901-1245647 (Clockwise)
Preceding gene: 123966638
Following gene: 123966640
Centisome position: 73.05
GC content: 26.91
Gene sequence:
>747_bases ATGACTTTAAAATTAATTAATGATCAAAAGTTTAAGAGACTTCCAAAAGCAATTATATTTGATACGGATAATACTTTATA TTCGTACGCACCAGCTAATGAATTAGCTTTAAAATCTGTTTTCACAAAAGCAGAAATATTATTAGATATAAATAGAAATT TATTTGAAGAGAAATTCAAAGAAGCTAGAATTGAAATAAAAAAAAGAATATCTAATCAAGCTAGTTCTCATAGTAGATTA CTTTATATTCAGAGAACAATAGAACTTCTAGGATTTAAAACCCAGCTTTTATTAACACTTGACTTGGAGCAAACATACTG GAGAACATTCTTACAATCTTGCAATTTATTTCCTAACGTTAGAGAATTACTTGATAAACTAAATAATTTGAATATACAAA CTGCTATAATCACCGACCTTAATTCGCAAATTCAGTTTAGGAAAATAATATTTTTTGGGCTAGAACAATATTTTGATTAT GTTGTAACTTCAGAAGAAGCGGGTTCTGATAAACCAAGCAAAGCTCCCTTTGAACTAGCTCTAAAGAAATTGGATTTACT TCCTAATGAATGCTGGATGATCGGAGATAATCTAAATGCAGATATTATAGGTGGCAAAAATTGTGGTTTAACAACTTTAT ATAAATACGAATCTAAAGATGAAAGTAAAATTTATAAAATTATTCCTGATGCAAGTTTTAATGACTATAGTAAAATTTTA AATCTAATAAAAAAGATGAAAGTTTAA
Upstream 100 bases:
>100_bases AGATTACAATGCAAAATGGCAATCTAATATACTTGGATTAATGCAATTAATAATACTTATGCAAATCGCTTATGTTTTTA AATATAAAATTGAGAATTAA
Downstream 100 bases:
>100_bases TGATTTTATAATATTGTTTTAGGTAACATATCTAATGAATTGTGATAGTGATTATTTTATTATTAATTTAATTTTTCAAA ATAATATCTTATTGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTLKLINDQKFKRLPKAIIFDTDNTLYSYAPANELALKSVFTKAEILLDINRNLFEEKFKEARIEIKKRISNQASSHSRL LYIQRTIELLGFKTQLLLTLDLEQTYWRTFLQSCNLFPNVRELLDKLNNLNIQTAIITDLNSQIQFRKIIFFGLEQYFDY VVTSEEAGSDKPSKAPFELALKKLDLLPNECWMIGDNLNADIIGGKNCGLTTLYKYESKDESKIYKIIPDASFNDYSKIL NLIKKMKV
Sequences:
>Translated_248_residues MTLKLINDQKFKRLPKAIIFDTDNTLYSYAPANELALKSVFTKAEILLDINRNLFEEKFKEARIEIKKRISNQASSHSRL LYIQRTIELLGFKTQLLLTLDLEQTYWRTFLQSCNLFPNVRELLDKLNNLNIQTAIITDLNSQIQFRKIIFFGLEQYFDY VVTSEEAGSDKPSKAPFELALKKLDLLPNECWMIGDNLNADIIGGKNCGLTTLYKYESKDESKIYKIIPDASFNDYSKIL NLIKKMKV >Mature_247_residues TLKLINDQKFKRLPKAIIFDTDNTLYSYAPANELALKSVFTKAEILLDINRNLFEEKFKEARIEIKKRISNQASSHSRLL YIQRTIELLGFKTQLLLTLDLEQTYWRTFLQSCNLFPNVRELLDKLNNLNIQTAIITDLNSQIQFRKIIFFGLEQYFDYV VTSEEAGSDKPSKAPFELALKKLDLLPNECWMIGDNLNADIIGGKNCGLTTLYKYESKDESKIYKIIPDASFNDYSKILN LIKKMKV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI23308749, Length=209, Percent_Identity=29.1866028708134, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR011950 - InterPro: IPR006439 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28799; Mature: 28668
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKLINDQKFKRLPKAIIFDTDNTLYSYAPANELALKSVFTKAEILLDINRNLFEEKFK CEEEECCCHHHHHCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHEEECCHHHHHHHHH EARIEIKKRISNQASSHSRLLYIQRTIELLGFKTQLLLTLDLEQTYWRTFLQSCNLFPNV HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHCCCCHHH RELLDKLNNLNIQTAIITDLNSQIQFRKIIFFGLEQYFDYVVTSEEAGSDKPSKAPFELA HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHH LKKLDLLPNECWMIGDNLNADIIGGKNCGLTTLYKYESKDESKIYKIIPDASFNDYSKIL HHHHHCCCCCCEEECCCCCEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHH NLIKKMKV HHHHHHCC >Mature Secondary Structure TLKLINDQKFKRLPKAIIFDTDNTLYSYAPANELALKSVFTKAEILLDINRNLFEEKFK EEEECCCHHHHHCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHEEECCHHHHHHHHH EARIEIKKRISNQASSHSRLLYIQRTIELLGFKTQLLLTLDLEQTYWRTFLQSCNLFPNV HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHCCCCHHH RELLDKLNNLNIQTAIITDLNSQIQFRKIIFFGLEQYFDYVVTSEEAGSDKPSKAPFELA HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHH LKKLDLLPNECWMIGDNLNADIIGGKNCGLTTLYKYESKDESKIYKIIPDASFNDYSKIL HHHHHCCCCCCEEECCCCCEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHH NLIKKMKV HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]