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The map label for this gene is rfbH [H]

Identifier: 123966632

GI number: 123966632

Start: 1236161

End: 1237336

Strand: Reverse

Name: rfbH [H]

Synonym: P9515_13991

Alternate gene names: 123966632

Gene position: 1237336-1236161 (Counterclockwise)

Preceding gene: 123966633

Following gene: 123966626

Centisome position: 72.61

GC content: 29.0

Gene sequence:

>1176_bases
ATGATTCCTCTTATGAAAGATACATTTATAGAAGAATATAAAACAAAGTTAGCTTTATCTGAATTCATATTATCTTCCAA
TAAGCTAAGTATGGGAATAAAATGCTCTGAATTTGAGAAAGAGTTTTCTATATATCAAGGTAGAAAAGATTCTATTCTAT
TTAATAGTGGCGGGAGTGCTAATTTGGCTCTGCTTCAGTCTTTGAAAAATTTAGGGCGCTTAAAAAATAACTCTAAAGTT
GGTTTCTCGGCTCTTACTTGGTCTACTAATGTAATGCCAATAATTCAATTAGGAATGGAACCTATAGCTTTAGATTGCGA
TCCCAAAACACTTAATGTCATGTCTAAAAATATAATAGATGTTATTGATAATTTAAATTTAGATGCAATTTTTTTAACCA
ATGTTTTAGGCTTTACAGGAGATCTTGATAAGATTAAAGAAATTTGTGATGCAAGAAATATTATTTTAATTGAAGATAAT
TGTGAAGCACTTGGAAGTATTGTATCTGGTAAAAAATCTGGAAATTATGGCTTAGCGTCAACCTTCTCCTTTTTTGTGGC
TCATCATATGTCCACAATTGAGGGTGGCATGGTTACGACAGATGATAATGATTTAGAAGAAATGTTAAGGATGGTTAGAT
CTAATGGTTGGGATCGTAATCTTAATTCTGATCAAAAGTTCAAAATTAGAAAAACTCACAATATACTTAGTGAATTTGAC
TCTAAGTATAGTTTTTATGATTTAGGATATAATTTAAGACCTACAGAAATAACAGGTTTTTTGGGTTTAAATCAATTAAA
ATATTTAAATGAAAATATCAAAAAAAGAAATTCAAATCACTTAGTCCTTAATTCTGTTGTTGTTGATAATACAGATTTAC
AAAGCATTAATTACGATCATCAAGATTTTCTTTCTCCATTCGCCTTTCCCGTTGTTTGCAAATCAGCTGAAATAAAAAAT
TTTTACTTTAACCAATTTTCTGGAGCTGGAGTAGAAATAAGACCAATGATTGCAGGAAATATTCAATTTCAGCCTTTCTA
TAAAAAATACTCTAAATATTCAACCTCTTGTCCTGGTGCAGATTTTTTAACTTCAAATAGTTTCTATTGTGGTAATTATC
CTGGATTATCAACTTCAGATTTGGAAATTATTAAAAATTGTCTAAAGAAATATTAG

Upstream 100 bases:

>100_bases
TTGGTTTCAAACCTAAAATCAATCTGGATGATGGATTAGTTTCCACCATAAATTCATATAAAGCTTTAAAATTAAATGAA
GAAATTAATAATAAGAAGCA

Downstream 100 bases:

>100_bases
ATTTTAATAGACAATAATTGTTTTAAAAAATTTCTTATTTTTACAATTTTAAATTTTAAAATACCTATTAAGAAAGATGT
TAAAATTATTGATTTTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MIPLMKDTFIEEYKTKLALSEFILSSNKLSMGIKCSEFEKEFSIYQGRKDSILFNSGGSANLALLQSLKNLGRLKNNSKV
GFSALTWSTNVMPIIQLGMEPIALDCDPKTLNVMSKNIIDVIDNLNLDAIFLTNVLGFTGDLDKIKEICDARNIILIEDN
CEALGSIVSGKKSGNYGLASTFSFFVAHHMSTIEGGMVTTDDNDLEEMLRMVRSNGWDRNLNSDQKFKIRKTHNILSEFD
SKYSFYDLGYNLRPTEITGFLGLNQLKYLNENIKKRNSNHLVLNSVVVDNTDLQSINYDHQDFLSPFAFPVVCKSAEIKN
FYFNQFSGAGVEIRPMIAGNIQFQPFYKKYSKYSTSCPGADFLTSNSFYCGNYPGLSTSDLEIIKNCLKKY

Sequences:

>Translated_391_residues
MIPLMKDTFIEEYKTKLALSEFILSSNKLSMGIKCSEFEKEFSIYQGRKDSILFNSGGSANLALLQSLKNLGRLKNNSKV
GFSALTWSTNVMPIIQLGMEPIALDCDPKTLNVMSKNIIDVIDNLNLDAIFLTNVLGFTGDLDKIKEICDARNIILIEDN
CEALGSIVSGKKSGNYGLASTFSFFVAHHMSTIEGGMVTTDDNDLEEMLRMVRSNGWDRNLNSDQKFKIRKTHNILSEFD
SKYSFYDLGYNLRPTEITGFLGLNQLKYLNENIKKRNSNHLVLNSVVVDNTDLQSINYDHQDFLSPFAFPVVCKSAEIKN
FYFNQFSGAGVEIRPMIAGNIQFQPFYKKYSKYSTSCPGADFLTSNSFYCGNYPGLSTSDLEIIKNCLKKY
>Mature_391_residues
MIPLMKDTFIEEYKTKLALSEFILSSNKLSMGIKCSEFEKEFSIYQGRKDSILFNSGGSANLALLQSLKNLGRLKNNSKV
GFSALTWSTNVMPIIQLGMEPIALDCDPKTLNVMSKNIIDVIDNLNLDAIFLTNVLGFTGDLDKIKEICDARNIILIEDN
CEALGSIVSGKKSGNYGLASTFSFFVAHHMSTIEGGMVTTDDNDLEEMLRMVRSNGWDRNLNSDQKFKIRKTHNILSEFD
SKYSFYDLGYNLRPTEITGFLGLNQLKYLNENIKKRNSNHLVLNSVVVDNTDLQSINYDHQDFLSPFAFPVVCKSAEIKN
FYFNQFSGAGVEIRPMIAGNIQFQPFYKKYSKYSTSCPGADFLTSNSFYCGNYPGLSTSDLEIIKNCLKKY

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=263, Percent_Identity=26.9961977186312, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44034; Mature: 44034

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLMKDTFIEEYKTKLALSEFILSSNKLSMGIKCSEFEKEFSIYQGRKDSILFNSGGSA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCEEEECCCCC
NLALLQSLKNLGRLKNNSKVGFSALTWSTNVMPIIQLGMEPIALDCDPKTLNVMSKNIID
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHH
VIDNLNLDAIFLTNVLGFTGDLDKIKEICDARNIILIEDNCEALGSIVSGKKSGNYGLAS
HHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCHHH
TFSFFVAHHMSTIEGGMVTTDDNDLEEMLRMVRSNGWDRNLNSDQKFKIRKTHNILSEFD
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHC
SKYSFYDLGYNLRPTEITGFLGLNQLKYLNENIKKRNSNHLVLNSVVVDNTDLQSINYDH
CCCEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCH
QDFLSPFAFPVVCKSAEIKNFYFNQFSGAGVEIRPMIAGNIQFQPFYKKYSKYSTSCPGA
HHHHCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCEEECHHHHHHHCCCCCCCCC
DFLTSNSFYCGNYPGLSTSDLEIIKNCLKKY
CCCCCCCEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIPLMKDTFIEEYKTKLALSEFILSSNKLSMGIKCSEFEKEFSIYQGRKDSILFNSGGSA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCEEEECCCCC
NLALLQSLKNLGRLKNNSKVGFSALTWSTNVMPIIQLGMEPIALDCDPKTLNVMSKNIID
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHH
VIDNLNLDAIFLTNVLGFTGDLDKIKEICDARNIILIEDNCEALGSIVSGKKSGNYGLAS
HHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCHHH
TFSFFVAHHMSTIEGGMVTTDDNDLEEMLRMVRSNGWDRNLNSDQKFKIRKTHNILSEFD
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHC
SKYSFYDLGYNLRPTEITGFLGLNQLKYLNENIKKRNSNHLVLNSVVVDNTDLQSINYDH
CCCEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCH
QDFLSPFAFPVVCKSAEIKNFYFNQFSGAGVEIRPMIAGNIQFQPFYKKYSKYSTSCPGA
HHHHCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCEEECHHHHHHHCCCCCCCCC
DFLTSNSFYCGNYPGLSTSDLEIIKNCLKKY
CCCCCCCEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]