Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966562

Identifier: 123966562

GI number: 123966562

Start: 1167146

End: 1168114

Strand: Reverse

Name: 123966562

Synonym: P9515_13291

Alternate gene names: NA

Gene position: 1168114-1167146 (Counterclockwise)

Preceding gene: 123966563

Following gene: 123966559

Centisome position: 68.54

GC content: 27.24

Gene sequence:

>969_bases
ATGAGGTTATTTTTTTTTATCTTTATATTTACTCAATTATTAAATTCTTTGGTTGTTTTTGCAGAAAAAGATAAAAAAGA
GTCTCGCGAAATAAATTCAATTAGATGGGAGAAAGTTCAAGAAAAAAATTCAAATAATCTAGAAAAGATTATTTGGAAAT
CATATAAGGATGATGAAAGTTATTTTCAAAATGAAATTGACTTAAAACCTAATATAGAAAACCTTAATGATTATAGAAAT
AAAGGTAAAGATAAGGATAAAGATATATTCACGCAGTCTCTCAATAAAAGAAATAGATTACTTAATTTTGGTGGAATCAC
GGTCAGCAATGCTTTGATACCTAATGAGGGGACTTCACAAATAAATTTGAATTATGACTCAAAAGGTAATTTGTTTGGAT
TTTATGGTTATTCTTTATCAAATATATTTCAATTAGAACTAAGTGCTGGATCTTTTGATGGTGTGAGTTTAGTTGATAAT
AAACATTCAAGTCTGCAAAGGACATTTTTGAGCAAGAACAATTTTAATTATAGAGTAGGAGGTAAATTATTAATTCTTAG
TCCACAAAATTTTGATCCTTTTTGGATGACATTTAGAACATCCTTTGGAAGTAATGAAAAGACTAATCAAGGTTACCTAA
TCACTGAATTAATAAATACTATAAGAATTAATGATAAGGTTGTTTTTAATATTAGTCCAAAATACTTTTTTAGTGAGATA
GAAACTTTTGGGGCGGTTGGTATCTCAAGTTATATTAATTTATTAGATAATTTGCAGCTTATTCCTGAAATAAATACTTC
ATTGAAAAATGAACAAGATTTCAGCTCCTCATTAGGATTAAGATATTCTTTCCGACCAGGAAAATCAATTGATTTATATT
ATTCCAATGCAGCAGGTGTTCAGGATATTGGACAGCTTCTTGAGGATAAAGTATATCGATTTGGCATTAAGTTGAATTTT
ATATTTTAG

Upstream 100 bases:

>100_bases
CGAGTGCCTACGGCTATTTGATTTCTAAGTTGAATTGATAGATATAGTTTATAAGGAGTATTATTAAAGGGTTAAATTGA
TAAGTCGAAGATTTTTCTAA

Downstream 100 bases:

>100_bases
ATAATCTAGTTTCACCAGAATGGGTCAGTAGTAAATGAAACTTTTAATGTAGATTCTTTATTCTTTTTTATACTACTTAT
ACAAGGCCTCACTGTTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDESYFQNEIDLKPNIENLNDYRN
KGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQINLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDN
KHSSLQRTFLSKNNFNYRVGGKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI
ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGVQDIGQLLEDKVYRFGIKLNF
IF

Sequences:

>Translated_322_residues
MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDESYFQNEIDLKPNIENLNDYRN
KGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQINLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDN
KHSSLQRTFLSKNNFNYRVGGKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI
ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGVQDIGQLLEDKVYRFGIKLNF
IF
>Mature_322_residues
MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDESYFQNEIDLKPNIENLNDYRN
KGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQINLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDN
KHSSLQRTFLSKNNFNYRVGGKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI
ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGVQDIGQLLEDKVYRFGIKLNF
IF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37238; Mature: 37238

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDES
CHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH
YFQNEIDLKPNIENLNDYRNKGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQ
HHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCEEEECCEEEECEECCCCCCCE
INLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDNKHSSLQRTFLSKNNFNYRVG
EEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEC
GKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI
CEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHEECCCEEEEEECHHHHHHHH
ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGV
HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHCCCEEEEECCCCEEEEEECCCCCH
QDIGQLLEDKVYRFGIKLNFIF
HHHHHHHHHHHHHEEEEEEEEC
>Mature Secondary Structure
MRLFFFIFIFTQLLNSLVVFAEKDKKESREINSIRWEKVQEKNSNNLEKIIWKSYKDDES
CHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH
YFQNEIDLKPNIENLNDYRNKGKDKDKDIFTQSLNKRNRLLNFGGITVSNALIPNEGTSQ
HHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCEEEECCEEEECEECCCCCCCE
INLNYDSKGNLFGFYGYSLSNIFQLELSAGSFDGVSLVDNKHSSLQRTFLSKNNFNYRVG
EEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEC
GKLLILSPQNFDPFWMTFRTSFGSNEKTNQGYLITELINTIRINDKVVFNISPKYFFSEI
CEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHEECCCEEEEEECHHHHHHHH
ETFGAVGISSYINLLDNLQLIPEINTSLKNEQDFSSSLGLRYSFRPGKSIDLYYSNAAGV
HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHCCCEEEEECCCCEEEEEECCCCCH
QDIGQLLEDKVYRFGIKLNFIF
HHHHHHHHHHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA