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The map label for this gene is ydiU [C]

Identifier: 123966521

GI number: 123966521

Start: 1131565

End: 1133268

Strand: Direct

Name: ydiU [C]

Synonym: P9515_12881

Alternate gene names: 123966521

Gene position: 1131565-1133268 (Clockwise)

Preceding gene: 123966520

Following gene: 123966524

Centisome position: 66.4

GC content: 34.98

Gene sequence:

>1704_bases
ATGTCACAAAAACCTGAATCACTTAAAGATAAAGAAACTAAAAATTTTTCTGAGTTTTCACAATTAGCAGATTTTTCTTT
AATGAATTCTCTCAAAGCTGATCCTCATTCAACAAAAAACGGTAATGATCACAGGCCTAGGCCAGTTTATTCAGGTCATT
ATGTTCCTGTCACCCCAACACCAATTCCAGAACCAAAATATATCGCTCATAGCAAAACATTGTTTGATGAATTGGGATTA
AGTTCTGATCTTACAAAAGATAAAAAGTTTTGTAGTTTTTTTTCAGGAGATATCGAAGTTTCAGAGTACCCAATGCGACC
CTTTGGCTGGGCAACGGGGTATGCATTGTCTATTTATGGCACTGAATATACTCAGCAATGTCCTTTTGGGACCGGTGATG
GATATGGGGATGGTCGAGCAATTTCTGTATTCGAAGGTTTATTTAATGAAAAAAGAATGGAGATGCAACTAAAGGGAGGT
GGTCCTACACCTTATTGTCGTGGTGCAGATGGCAGAGCAGTCCTACGATCAAGTGTTCGCGAATTTCTTGCACAGGAATT
CATGCATGCCTTGGGAATTCCCACTTCAAGATCTTTAATACTTTATGTATCAGGAACAGAAATAGTTAGAAGACCATGGT
ACTCAAAGGGTTCAAAGTACTATGAGCCTGATATCATGCTTGATAATCATGCGGCGATTACTACTCGTGTTGCTCCATCA
TTTTTACGTGTAGGCCAGATTGAGCTATTTGCTCGCAGAGTTCGAAGTAATTCTCATAATGAAGCTTTTAATGAGCTAAA
ACTTATAGTGCAACACCTTATAGATAGGAATTATAAAGAAGAAATTGATCCCAGCAAATCATTTGCTGAGAAGATTATTA
AGTTGGCTTATTTATATCGAGAAAGACTCATATCACTTGTCAGTAATTGGATGAGGGTTGGTTATTGCCAAGGGAATTTT
AATAGCGATAATTGTGCGGCTGGAGGATATACTTTGGACTATGGTCCTTTTGGTTTTTGTGAATTATTTGACCCAAGATT
TCAGCCTTGGACTGGAGGTGGAGAACATTTTTCATTTTTCAATCAGCCTTTTGCTGCAGAAATTAACTTTAAGATGTTTT
GTTTATCTCTCAAACCTTTACTTTTAGAAAATAAAAAAGACATAGAAAAATTAGAGCAAATCAAAAATGATTTTTCTAAA
GTAATGAACAAAAAAATTCAATTAATGTGGGCACGAAAGCTTGGTTTAGAAAAATACGAAGAAACTCTTACCCACGAACT
TTTCAATCTTATGTTTACCTCTAAGGCTGACTTCACTATTTTCTTCAGAAAGCTTTCCAATATTCCCGAAAATATATCTT
CTCTAAAAAAGAGTTTTTACGTACCTCTTACTGATGAACTTGAACAAAAATGGAACATTTGGCTCAAAAAATGGCAAGAC
TTTATCAAAAAAGAGATTGATATTAAAGAAATATCAAAATCAATGAGACAAGTAAACCCAAAATTTACTTGGCGTGAATG
GATGATAGTTTCTGCATATGAAGATGCTGAGGAGGGTAACTATAGCAAAATAAAAGAATTACAAACTATTTTAAGCAATC
CATATGAAGAGCAATCTTTGGAAACAGAGCAAAAATACGATCGCCTAAAGCCAAATCAATTTTTCAATTATGGAGGTATT
TCACATTACAGTTGTTCATCTTAA

Upstream 100 bases:

>100_bases
CAAATTAGTTTAAATTTATCTCTATGAAATAAAATATAAGATAATGATAATTATTTACTTTGAGAAATAAAAACCTAATT
GATAATAAAGGCGTAAATTA

Downstream 100 bases:

>100_bases
TAAAGATATTTTTTAATTATTGAAATTAGTAAATGATTAAAATATATTCTTTATTTGTTGATTGACATTGGTATCCTATC
TGCTCATATTGAGCCAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSQKPESLKDKETKNFSEFSQLADFSLMNSLKADPHSTKNGNDHRPRPVYSGHYVPVTPTPIPEPKYIAHSKTLFDELGL
SSDLTKDKKFCSFFSGDIEVSEYPMRPFGWATGYALSIYGTEYTQQCPFGTGDGYGDGRAISVFEGLFNEKRMEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQEFMHALGIPTSRSLILYVSGTEIVRRPWYSKGSKYYEPDIMLDNHAAITTRVAPS
FLRVGQIELFARRVRSNSHNEAFNELKLIVQHLIDRNYKEEIDPSKSFAEKIIKLAYLYRERLISLVSNWMRVGYCQGNF
NSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFFNQPFAAEINFKMFCLSLKPLLLENKKDIEKLEQIKNDFSK
VMNKKIQLMWARKLGLEKYEETLTHELFNLMFTSKADFTIFFRKLSNIPENISSLKKSFYVPLTDELEQKWNIWLKKWQD
FIKKEIDIKEISKSMRQVNPKFTWREWMIVSAYEDAEEGNYSKIKELQTILSNPYEEQSLETEQKYDRLKPNQFFNYGGI
SHYSCSS

Sequences:

>Translated_567_residues
MSQKPESLKDKETKNFSEFSQLADFSLMNSLKADPHSTKNGNDHRPRPVYSGHYVPVTPTPIPEPKYIAHSKTLFDELGL
SSDLTKDKKFCSFFSGDIEVSEYPMRPFGWATGYALSIYGTEYTQQCPFGTGDGYGDGRAISVFEGLFNEKRMEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQEFMHALGIPTSRSLILYVSGTEIVRRPWYSKGSKYYEPDIMLDNHAAITTRVAPS
FLRVGQIELFARRVRSNSHNEAFNELKLIVQHLIDRNYKEEIDPSKSFAEKIIKLAYLYRERLISLVSNWMRVGYCQGNF
NSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFFNQPFAAEINFKMFCLSLKPLLLENKKDIEKLEQIKNDFSK
VMNKKIQLMWARKLGLEKYEETLTHELFNLMFTSKADFTIFFRKLSNIPENISSLKKSFYVPLTDELEQKWNIWLKKWQD
FIKKEIDIKEISKSMRQVNPKFTWREWMIVSAYEDAEEGNYSKIKELQTILSNPYEEQSLETEQKYDRLKPNQFFNYGGI
SHYSCSS
>Mature_566_residues
SQKPESLKDKETKNFSEFSQLADFSLMNSLKADPHSTKNGNDHRPRPVYSGHYVPVTPTPIPEPKYIAHSKTLFDELGLS
SDLTKDKKFCSFFSGDIEVSEYPMRPFGWATGYALSIYGTEYTQQCPFGTGDGYGDGRAISVFEGLFNEKRMEMQLKGGG
PTPYCRGADGRAVLRSSVREFLAQEFMHALGIPTSRSLILYVSGTEIVRRPWYSKGSKYYEPDIMLDNHAAITTRVAPSF
LRVGQIELFARRVRSNSHNEAFNELKLIVQHLIDRNYKEEIDPSKSFAEKIIKLAYLYRERLISLVSNWMRVGYCQGNFN
SDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFFNQPFAAEINFKMFCLSLKPLLLENKKDIEKLEQIKNDFSKV
MNKKIQLMWARKLGLEKYEETLTHELFNLMFTSKADFTIFFRKLSNIPENISSLKKSFYVPLTDELEQKWNIWLKKWQDF
IKKEIDIKEISKSMRQVNPKFTWREWMIVSAYEDAEEGNYSKIKELQTILSNPYEEQSLETEQKYDRLKPNQFFNYGGIS
HYSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=481, Percent_Identity=29.3139293139293, Blast_Score=169, Evalue=9e-42,
Organism=Escherichia coli, GI1787999, Length=526, Percent_Identity=29.6577946768061, Blast_Score=195, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6325034, Length=415, Percent_Identity=28.433734939759, Blast_Score=138, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 65674; Mature: 65543

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKPESLKDKETKNFSEFSQLADFSLMNSLKADPHSTKNGNDHRPRPVYSGHYVPVTPT
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
PIPEPKYIAHSKTLFDELGLSSDLTKDKKFCSFFSGDIEVSEYPMRPFGWATGYALSIYG
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEC
TEYTQQCPFGTGDGYGDGRAISVFEGLFNEKRMEMQLKGGGPTPYCRGADGRAVLRSSVR
CCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
EFLAQEFMHALGIPTSRSLILYVSGTEIVRRPWYSKGSKYYEPDIMLDNHAAITTRVAPS
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCCCCEECCCEEECCCCCEEHHHCHH
FLRVGQIELFARRVRSNSHNEAFNELKLIVQHLIDRNYKEEIDPSKSFAEKIIKLAYLYR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH
ERLISLVSNWMRVGYCQGNFNSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFF
HHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCHHHC
NQPFAAEINFKMFCLSLKPLLLENKKDIEKLEQIKNDFSKVMNKKIQLMWARKLGLEKYE
CCCCEEECCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ETLTHELFNLMFTSKADFTIFFRKLSNIPENISSLKKSFYVPLTDELEQKWNIWLKKWQD
HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FIKKEIDIKEISKSMRQVNPKFTWREWMIVSAYEDAEEGNYSKIKELQTILSNPYEEQSL
HHHHCCCHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH
ETEQKYDRLKPNQFFNYGGISHYSCSS
HHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQKPESLKDKETKNFSEFSQLADFSLMNSLKADPHSTKNGNDHRPRPVYSGHYVPVTPT
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
PIPEPKYIAHSKTLFDELGLSSDLTKDKKFCSFFSGDIEVSEYPMRPFGWATGYALSIYG
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEC
TEYTQQCPFGTGDGYGDGRAISVFEGLFNEKRMEMQLKGGGPTPYCRGADGRAVLRSSVR
CCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
EFLAQEFMHALGIPTSRSLILYVSGTEIVRRPWYSKGSKYYEPDIMLDNHAAITTRVAPS
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCCCCEECCCEEECCCCCEEHHHCHH
FLRVGQIELFARRVRSNSHNEAFNELKLIVQHLIDRNYKEEIDPSKSFAEKIIKLAYLYR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH
ERLISLVSNWMRVGYCQGNFNSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFF
HHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCHHHC
NQPFAAEINFKMFCLSLKPLLLENKKDIEKLEQIKNDFSKVMNKKIQLMWARKLGLEKYE
CCCCEEECCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ETLTHELFNLMFTSKADFTIFFRKLSNIPENISSLKKSFYVPLTDELEQKWNIWLKKWQD
HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FIKKEIDIKEISKSMRQVNPKFTWREWMIVSAYEDAEEGNYSKIKELQTILSNPYEEQSL
HHHHCCCHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH
ETEQKYDRLKPNQFFNYGGISHYSCSS
HHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA