Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966504

Identifier: 123966504

GI number: 123966504

Start: 1115762

End: 1116190

Strand: Direct

Name: 123966504

Synonym: P9515_12711

Alternate gene names: NA

Gene position: 1115762-1116190 (Clockwise)

Preceding gene: 123966499

Following gene: 123966509

Centisome position: 65.47

GC content: 25.17

Gene sequence:

>429_bases
ATGAAAATTTTTGAAAGGGCGAAAATAGGTTCAACAGTTCAAATTAAACTTGATTTAGCAAAAAATCGATTAGAGAAAGA
GAGTCTAAAGGCAATTGAAGCTTCCTCAATATGCAAAATAATTGATTTCAAAATTACTGATGGTAAAGGTATAGGAGTTA
TTTTAAAATTATCGAATGGGAAAGAAGAATGGTTCTTTGAAGAAGAGATAGACGTTCTCGATGAAAATGGTGAAATTATC
GAATACATAGAAATCTTAGAAGAAAATAATTTGTTATTTGAAATTTTCAATTTCATTAAAATAGTTTCTTGGACTTTATT
AGCATTAATAATTCCTACAGATTATAAGCAAAAACATAAAATTAAAGATCTTATAAATCCACTAAATTTTCTTAGTTGGT
TATTAAATTCATTTAAAGATGTTTTATAA

Upstream 100 bases:

>100_bases
CAGAATTAAAAATTTTTTTGAATTTATTGAAATAATAATTAAATAGACTTTCAAGCAATTCCTCAATTCAGTTAAACAGT
GAGTATAATTACTTATAAAA

Downstream 100 bases:

>100_bases
AATCTTCAAAATGCACTATAAAAATAACTTATATTTATCAACATTAAAGCGAATCTCATTTTGGCGAATTATCCAATTAA
CGATATAGCGCTACTGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKIFERAKIGSTVQIKLDLAKNRLEKESLKAIEASSICKIIDFKITDGKGIGVILKLSNGKEEWFFEEEIDVLDENGEII
EYIEILEENNLLFEIFNFIKIVSWTLLALIIPTDYKQKHKIKDLINPLNFLSWLLNSFKDVL

Sequences:

>Translated_142_residues
MKIFERAKIGSTVQIKLDLAKNRLEKESLKAIEASSICKIIDFKITDGKGIGVILKLSNGKEEWFFEEEIDVLDENGEII
EYIEILEENNLLFEIFNFIKIVSWTLLALIIPTDYKQKHKIKDLINPLNFLSWLLNSFKDVL
>Mature_142_residues
MKIFERAKIGSTVQIKLDLAKNRLEKESLKAIEASSICKIIDFKITDGKGIGVILKLSNGKEEWFFEEEIDVLDENGEII
EYIEILEENNLLFEIFNFIKIVSWTLLALIIPTDYKQKHKIKDLINPLNFLSWLLNSFKDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16489; Mature: 16489

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFERAKIGSTVQIKLDLAKNRLEKESLKAIEASSICKIIDFKITDGKGIGVILKLSNG
CCCCHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEECCC
KEEWFFEEEIDVLDENGEIIEYIEILEENNLLFEIFNFIKIVSWTLLALIIPTDYKQKHK
CCCCEEHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IKDLINPLNFLSWLLNSFKDVL
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIFERAKIGSTVQIKLDLAKNRLEKESLKAIEASSICKIIDFKITDGKGIGVILKLSNG
CCCCHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEECCC
KEEWFFEEEIDVLDENGEIIEYIEILEENNLLFEIFNFIKIVSWTLLALIIPTDYKQKHK
CCCCEEHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IKDLINPLNFLSWLLNSFKDVL
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA