Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966438

Identifier: 123966438

GI number: 123966438

Start: 1062540

End: 1063046

Strand: Reverse

Name: 123966438

Synonym: P9515_12051

Alternate gene names: NA

Gene position: 1063046-1062540 (Counterclockwise)

Preceding gene: 123966439

Following gene: 123966436

Centisome position: 62.38

GC content: 24.85

Gene sequence:

>507_bases
ATGACAGAAAAATTTAAAACTCTTTTTTTTGTTAGAAGTTCTCTTATTACATTATATTTTGCTCTTACGATTCCTATTCC
GTTTATTTCAAGTGAAAATTTAAAAATACCCTCAATAATAACTTTTACTTTTGGACTTTTTTTGATTTTTAATATAACAA
ATGATTATGTATACACATGTGATAAAAAAATTTCTTATCAAACAAGTTTTATTTCTAAAATTTTTGGAAAAGAAAATTGG
GAAATTTTTTGGAAAGATATTAAATTAATCAAATCTTTGCCAACGAGCCAAGGGAGCAAGGTCCACTACTTCATTACTAA
TAAAAATGAAAGTTTTCTTGTCCCACAGAGGATTGAAAATCTAGAAAGGTTTGTATCTATAGTTGAAAACAAAACAAAAT
TAAATATAGAAAAAATATCGTTTATTTCGCCTTTGTGGACATATAAATTATTAACTTACATGTCTGTTTTGATGATTGCT
GGAGAAATAATAGCTTTTGTAATTTAA

Upstream 100 bases:

>100_bases
TAGCGTTTAGTGGTTATGCTTGCGCTCACAAAATAGGATCTAAATTAAATATAAATAGTTTTAATTTGCCAGACTAACCA
GTTTCAATAATTTCAATAAG

Downstream 100 bases:

>100_bases
ATATTATCAATACTAAATCTATATCCTTGTTGTCGAACCGTAGTAATACCTCCTCCCTCTCCTAATCCTGCCTGCTCTAA
TTTTCTACGCAATGTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTEKFKTLFFVRSSLITLYFALTIPIPFISSENLKIPSIITFTFGLFLIFNITNDYVYTCDKKISYQTSFISKIFGKENW
EIFWKDIKLIKSLPTSQGSKVHYFITNKNESFLVPQRIENLERFVSIVENKTKLNIEKISFISPLWTYKLLTYMSVLMIA
GEIIAFVI

Sequences:

>Translated_168_residues
MTEKFKTLFFVRSSLITLYFALTIPIPFISSENLKIPSIITFTFGLFLIFNITNDYVYTCDKKISYQTSFISKIFGKENW
EIFWKDIKLIKSLPTSQGSKVHYFITNKNESFLVPQRIENLERFVSIVENKTKLNIEKISFISPLWTYKLLTYMSVLMIA
GEIIAFVI
>Mature_167_residues
TEKFKTLFFVRSSLITLYFALTIPIPFISSENLKIPSIITFTFGLFLIFNITNDYVYTCDKKISYQTSFISKIFGKENWE
IFWKDIKLIKSLPTSQGSKVHYFITNKNESFLVPQRIENLERFVSIVENKTKLNIEKISFISPLWTYKLLTYMSVLMIAG
EIIAFVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19688; Mature: 19556

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKFKTLFFVRSSLITLYFALTIPIPFISSENLKIPSIITFTFGLFLIFNITNDYVYTC
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
DKKISYQTSFISKIFGKENWEIFWKDIKLIKSLPTSQGSKVHYFITNKNESFLVPQRIEN
CCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECHHHHHH
LERFVSIVENKTKLNIEKISFISPLWTYKLLTYMSVLMIAGEIIAFVI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEKFKTLFFVRSSLITLYFALTIPIPFISSENLKIPSIITFTFGLFLIFNITNDYVYTC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
DKKISYQTSFISKIFGKENWEIFWKDIKLIKSLPTSQGSKVHYFITNKNESFLVPQRIEN
CCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECHHHHHH
LERFVSIVENKTKLNIEKISFISPLWTYKLLTYMSVLMIAGEIIAFVI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]