| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is srmB [H]
Identifier: 123966425
GI number: 123966425
Start: 1047510
End: 1049297
Strand: Reverse
Name: srmB [H]
Synonym: P9515_11921
Alternate gene names: 123966425
Gene position: 1049297-1047510 (Counterclockwise)
Preceding gene: 123966426
Following gene: 123966424
Centisome position: 61.57
GC content: 30.15
Gene sequence:
>1788_bases ATGGCATCAAATAAACAAAAACAATTGGAAGAGAAAGATGAAGATAATTTTGGGGAAGAAACTAGTTCTAAACACGATTC AAAAGAAATAGAAAATAATTTGAAAATTATTTCTGAAGATAAACTTTCTGCCGAGAAGGAAGATATTGAAAAAGGGTTTG CTTGCTTTGGGTTTAATAAATTAATATTAAATTCATTGGAAAATAAAGGATATAAAATTCCTACACCTATACAAAAAGCC GCAATTCCAGAATTAATGCTTGGTAGAGATTTGTTAGGTCAAGCTCAAACTGGTACAGGGAAAACGGCAGCCTTCGCTCT CCCAATAATAGAAAAGCTTGAAAATAACAAAGAATCAAACGCTAAAGTTTTGGTGATGACCCCAACAAGGGAGTTGGCTA CTCAAGTAGCAGATTCTTTCAAGAGTTATAGTGTTGAATCAACCAATTTAAGGACTTTAGCAATATATGGAGGGACTGAT TTTAGGAATCAAATCTCATCACTTAAGAGGAAGACAGACGTTGTTGTTGGTACACCTGGAAGAATAATGGACCATATTAG ACAAGGCACATTCAAAATTAATAATATAAATTGTCTAGTCCTTGATGAAGCTGACGAAATGTTGAAAATGGGATTTCTTG AAGATATTGAATGGATAATAGATAAACTTCCAGAAAACAAACAAATGGTATTGTTCTCTGCAACAATGCCAAATGAGATA AGAAACATAGCAAAAAAATATCTTAATGATCCAGCTGAGATACTTATTAAAAGCGTAAAGAAAGAAACTCAATTAATTAC CCAAAGATATATTAATGTTCAAAGACACCATAAGTTAGAAGCTCTAAAAAGAATATTAGAAATTACTAATGAAGGAGTAA TAATATTTGTGAGGACAAAATTACTTACTACTTCTATAGCTGAAGCATTGGAAAATTCAGGCCATAGTGTGGCTGTACTT AACGGTGATATTCCACAGAATCAAAGAGAAAATACAGTTGATAGATTAAAAAAAGGATTTATTGATATTCTTGTAGCCAC TGATGTGGCAGCGAGAGGACTAGATGTTGAAAGGATTAAACTTGTTATAAACTACGATTTCCCTTTCGATAAGGAAACAT ATACTCATAGAATTGGAAGAACAGGGAGAGCTGGTAGATCTGGAGAAGCAATCTTATTTGTTAATCAAAGAGAAAAACAT TTTCTAAGGAACTTGGAAAACTCTACAAGAAATAAGATAGAAGAAATTGAGATACCGAATAATAAATTAATTAACGAAAA AAGGATGGGGAAATTAATTTCAAATTTAAATGAAATTTCACTTGCTCAAGAAAATAACGAAGAAAAAAAAGCTTTGATGA TCGATATTCTTGACATCTTAAGAGAAAAATATTCTATGAATGAATCAAACATTGCAATGGCAGCTATTAATTTAGCAATA GGAAATAAATCCTTTTTTCTAAATGAAGATGAATCTTGGATTTATAAACAAAATAATTCTGATCGTAATAGATCTAATAG AAATGGAAGTGGAAATAATCGGATGAGAAATATAAATAGAAGGAATAATTATCAAAATGATTCTTTTGAAACCTATAAAT TTAATTTCGGCAAAATGGATAGAGTTAGAGTATCAAATATAATTTCTTCTATATGTAACTCTACAAATATTAATGGTAGA TCTATAGGCAAGATACAAATATTTAATGAATATAGTTTGGTTGATTTACCAAAAGATTTGCATGGTGAAGTTAGGAATAA ATTGAGAAAATTAAGAATCAGAAATTAA
Upstream 100 bases:
>100_bases AGATGCTAGATTAGAAACTCGGCTCTGAAAGGCTAATCAACAATTTAAGATTTTTAGATAAATGTTGAGTGCCTGATCAG AAGATAATCAGGCATTTTTC
Downstream 100 bases:
>100_bases ATTTAGATCATGAGATCTACTCAAAAAAAAGTTTTTGTTTTTGTAAACTTTTTTCTATTATTTGGAAATTTAAATATTGA ATATTTAGCCCAAATAAAAA
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MASNKQKQLEEKDEDNFGEETSSKHDSKEIENNLKIISEDKLSAEKEDIEKGFACFGFNKLILNSLENKGYKIPTPIQKA AIPELMLGRDLLGQAQTGTGKTAAFALPIIEKLENNKESNAKVLVMTPTRELATQVADSFKSYSVESTNLRTLAIYGGTD FRNQISSLKRKTDVVVGTPGRIMDHIRQGTFKINNINCLVLDEADEMLKMGFLEDIEWIIDKLPENKQMVLFSATMPNEI RNIAKKYLNDPAEILIKSVKKETQLITQRYINVQRHHKLEALKRILEITNEGVIIFVRTKLLTTSIAEALENSGHSVAVL NGDIPQNQRENTVDRLKKGFIDILVATDVAARGLDVERIKLVINYDFPFDKETYTHRIGRTGRAGRSGEAILFVNQREKH FLRNLENSTRNKIEEIEIPNNKLINEKRMGKLISNLNEISLAQENNEEKKALMIDILDILREKYSMNESNIAMAAINLAI GNKSFFLNEDESWIYKQNNSDRNRSNRNGSGNNRMRNINRRNNYQNDSFETYKFNFGKMDRVRVSNIISSICNSTNINGR SIGKIQIFNEYSLVDLPKDLHGEVRNKLRKLRIRN
Sequences:
>Translated_595_residues MASNKQKQLEEKDEDNFGEETSSKHDSKEIENNLKIISEDKLSAEKEDIEKGFACFGFNKLILNSLENKGYKIPTPIQKA AIPELMLGRDLLGQAQTGTGKTAAFALPIIEKLENNKESNAKVLVMTPTRELATQVADSFKSYSVESTNLRTLAIYGGTD FRNQISSLKRKTDVVVGTPGRIMDHIRQGTFKINNINCLVLDEADEMLKMGFLEDIEWIIDKLPENKQMVLFSATMPNEI RNIAKKYLNDPAEILIKSVKKETQLITQRYINVQRHHKLEALKRILEITNEGVIIFVRTKLLTTSIAEALENSGHSVAVL NGDIPQNQRENTVDRLKKGFIDILVATDVAARGLDVERIKLVINYDFPFDKETYTHRIGRTGRAGRSGEAILFVNQREKH FLRNLENSTRNKIEEIEIPNNKLINEKRMGKLISNLNEISLAQENNEEKKALMIDILDILREKYSMNESNIAMAAINLAI GNKSFFLNEDESWIYKQNNSDRNRSNRNGSGNNRMRNINRRNNYQNDSFETYKFNFGKMDRVRVSNIISSICNSTNINGR SIGKIQIFNEYSLVDLPKDLHGEVRNKLRKLRIRN >Mature_594_residues ASNKQKQLEEKDEDNFGEETSSKHDSKEIENNLKIISEDKLSAEKEDIEKGFACFGFNKLILNSLENKGYKIPTPIQKAA IPELMLGRDLLGQAQTGTGKTAAFALPIIEKLENNKESNAKVLVMTPTRELATQVADSFKSYSVESTNLRTLAIYGGTDF RNQISSLKRKTDVVVGTPGRIMDHIRQGTFKINNINCLVLDEADEMLKMGFLEDIEWIIDKLPENKQMVLFSATMPNEIR NIAKKYLNDPAEILIKSVKKETQLITQRYINVQRHHKLEALKRILEITNEGVIIFVRTKLLTTSIAEALENSGHSVAVLN GDIPQNQRENTVDRLKKGFIDILVATDVAARGLDVERIKLVINYDFPFDKETYTHRIGRTGRAGRSGEAILFVNQREKHF LRNLENSTRNKIEEIEIPNNKLINEKRMGKLISNLNEISLAQENNEEKKALMIDILDILREKYSMNESNIAMAAINLAIG NKSFFLNEDESWIYKQNNSDRNRSNRNGSGNNRMRNINRRNNYQNDSFETYKFNFGKMDRVRVSNIISSICNSTNINGRS IGKIQIFNEYSLVDLPKDLHGEVRNKLRKLRIRN
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=385, Percent_Identity=36.8831168831169, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI13129006, Length=414, Percent_Identity=36.9565217391304, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI45446747, Length=377, Percent_Identity=36.3395225464191, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI45446743, Length=377, Percent_Identity=36.3395225464191, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=36.6754617414248, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI50659095, Length=420, Percent_Identity=36.6666666666667, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI31542656, Length=412, Percent_Identity=35.4368932038835, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=37.8378378378378, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=37.8378378378378, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=37.8378378378378, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=37.3626373626374, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=37.2340425531915, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=37.2340425531915, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI20149629, Length=364, Percent_Identity=35.4395604395604, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=35.3403141361257, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI222352149, Length=397, Percent_Identity=34.7607052896725, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=36.5217391304348, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=36.5217391304348, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI164664518, Length=395, Percent_Identity=33.4177215189873, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=36.5921787709497, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=35.1585014409222, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI83700235, Length=383, Percent_Identity=38.3812010443864, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.6946778711485, Blast_Score=222, Evalue=1e-57, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.6946778711485, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=36.6946778711485, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.6946778711485, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI164419743, Length=358, Percent_Identity=34.0782122905028, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI51094101, Length=358, Percent_Identity=34.0782122905028, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI4503529, Length=383, Percent_Identity=37.0757180156658, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI4758138, Length=345, Percent_Identity=35.9420289855072, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=34.2857142857143, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=34.2857142857143, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=34.5609065155807, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI55749865, Length=378, Percent_Identity=33.8624338624339, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=31.767955801105, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI256223453, Length=372, Percent_Identity=32.7956989247312, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=33.8461538461538, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=34.1025641025641, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=35.0404312668464, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI13514831, Length=438, Percent_Identity=29.4520547945205, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI38569505, Length=361, Percent_Identity=32.6869806094183, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI62241024, Length=354, Percent_Identity=35.0282485875706, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38569503, Length=361, Percent_Identity=32.6869806094183, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=418, Percent_Identity=31.8181818181818, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI41327779, Length=433, Percent_Identity=28.8683602771363, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI9506931, Length=412, Percent_Identity=29.126213592233, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=33.4239130434783, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI154759257, Length=445, Percent_Identity=28.314606741573, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI17505907, Length=403, Percent_Identity=26.5508684863524, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=30.1775147928994, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI256773275, Length=379, Percent_Identity=29.5514511873351, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI20336298, Length=191, Percent_Identity=32.9842931937173, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI9966805, Length=303, Percent_Identity=27.0627062706271, Blast_Score=110, Evalue=4e-24, Organism=Escherichia coli, GI87082221, Length=553, Percent_Identity=41.4104882459313, Blast_Score=434, Evalue=1e-123, Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=40.8, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787605, Length=420, Percent_Identity=35, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=38.1766381766382, Blast_Score=242, Evalue=6e-65, Organism=Escherichia coli, GI1788930, Length=379, Percent_Identity=38.2585751978892, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI48994977, Length=367, Percent_Identity=24.5231607629428, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71987143, Length=373, Percent_Identity=36.9973190348526, Blast_Score=254, Evalue=7e-68, Organism=Caenorhabditis elegans, GI71995724, Length=379, Percent_Identity=36.6754617414248, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17555296, Length=377, Percent_Identity=35.5437665782493, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17507121, Length=379, Percent_Identity=36.1477572559367, Blast_Score=249, Evalue=4e-66, Organism=Caenorhabditis elegans, GI86570094, Length=354, Percent_Identity=40.1129943502825, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510307, Length=418, Percent_Identity=37.0813397129187, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17510309, Length=418, Percent_Identity=37.0813397129187, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI71995514, Length=418, Percent_Identity=37.0813397129187, Blast_Score=242, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17510559, Length=483, Percent_Identity=32.2981366459627, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI32565321, Length=373, Percent_Identity=36.1930294906166, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI71995718, Length=399, Percent_Identity=34.5864661654135, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=35.5013550135501, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=38.0053908355795, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI115533224, Length=398, Percent_Identity=35.929648241206, Blast_Score=225, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=35.3760445682451, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=31.6526610644258, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=31.6526610644258, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI115532548, Length=393, Percent_Identity=33.587786259542, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI115532546, Length=393, Percent_Identity=33.587786259542, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=31.8965517241379, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=32.171581769437, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=33.6231884057971, Blast_Score=202, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507945, Length=372, Percent_Identity=35.2150537634409, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507881, Length=357, Percent_Identity=33.8935574229692, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507879, Length=358, Percent_Identity=31.8435754189944, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17509811, Length=452, Percent_Identity=32.5221238938053, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17536099, Length=430, Percent_Identity=31.1627906976744, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17536101, Length=390, Percent_Identity=32.8205128205128, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17553716, Length=373, Percent_Identity=31.6353887399464, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=32.9081632653061, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17505370, Length=384, Percent_Identity=31.5104166666667, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI193208216, Length=375, Percent_Identity=32, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17508543, Length=371, Percent_Identity=26.9541778975741, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=30.225988700565, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25148203, Length=455, Percent_Identity=25.0549450549451, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17507641, Length=403, Percent_Identity=28.5359801488834, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=26.2295081967213, Blast_Score=142, Evalue=7e-34, Organism=Caenorhabditis elegans, GI32564046, Length=391, Percent_Identity=28.3887468030691, Blast_Score=136, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71982862, Length=222, Percent_Identity=31.5315315315315, Blast_Score=132, Evalue=7e-31, Organism=Caenorhabditis elegans, GI25148291, Length=386, Percent_Identity=26.6839378238342, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17557982, Length=407, Percent_Identity=28.2555282555283, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71997889, Length=406, Percent_Identity=23.3990147783251, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=24.3323442136499, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17565430, Length=447, Percent_Identity=24.3847874720358, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71987152, Length=101, Percent_Identity=42.5742574257426, Blast_Score=96, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6323021, Length=493, Percent_Identity=34.2799188640974, Blast_Score=260, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6324217, Length=398, Percent_Identity=36.4321608040201, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=365, Percent_Identity=39.7260273972603, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=36.8279569892473, Blast_Score=243, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6321856, Length=445, Percent_Identity=33.7078651685393, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=373, Percent_Identity=35.3887399463807, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=35.3723404255319, Blast_Score=239, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=32.3809523809524, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=36.8852459016393, Blast_Score=223, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=36.8852459016393, Blast_Score=223, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321963, Length=415, Percent_Identity=34.6987951807229, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=33.7874659400545, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=449, Percent_Identity=31.4031180400891, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=32.5779036827195, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=32.4022346368715, Blast_Score=190, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=350, Percent_Identity=32, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320449, Length=366, Percent_Identity=32.7868852459016, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=347, Percent_Identity=33.4293948126801, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=436, Percent_Identity=30.2752293577982, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=31.0160427807487, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=367, Percent_Identity=32.425068119891, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=429, Percent_Identity=27.7389277389277, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=30.5361305361305, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=27.0718232044199, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319618, Length=173, Percent_Identity=38.150289017341, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=419, Percent_Identity=23.6276849642005, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24584399, Length=342, Percent_Identity=40.9356725146199, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24645031, Length=381, Percent_Identity=36.2204724409449, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24584994, Length=390, Percent_Identity=37.6923076923077, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24642151, Length=364, Percent_Identity=36.2637362637363, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=36.5853658536585, Blast_Score=238, Evalue=9e-63, Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=36.01108033241, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=37.7005347593583, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI21356161, Length=390, Percent_Identity=36.4102564102564, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI28574962, Length=372, Percent_Identity=37.6344086021505, Blast_Score=233, Evalue=4e-61, Organism=Drosophila melanogaster, GI24585582, Length=370, Percent_Identity=34.5945945945946, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI17977678, Length=398, Percent_Identity=34.6733668341709, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI18857967, Length=347, Percent_Identity=36.5994236311239, Blast_Score=222, Evalue=7e-58, Organism=Drosophila melanogaster, GI24583281, Length=366, Percent_Identity=33.6065573770492, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24583279, Length=366, Percent_Identity=33.6065573770492, Blast_Score=220, Evalue=3e-57, Organism=Drosophila melanogaster, GI24582080, Length=360, Percent_Identity=36.9444444444444, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24582078, Length=360, Percent_Identity=36.9444444444444, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI17136248, Length=360, Percent_Identity=36.9444444444444, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24582075, Length=360, Percent_Identity=36.9444444444444, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI28575014, Length=360, Percent_Identity=32.7777777777778, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=34.6883468834688, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=34.6883468834688, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=34.6883468834688, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=34.4827586206897, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=34.4827586206897, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=34.4827586206897, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=34.6883468834688, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=34.6883468834688, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=34.6883468834688, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=34.6883468834688, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=35.8288770053476, Blast_Score=209, Evalue=6e-54, Organism=Drosophila melanogaster, GI281365720, Length=330, Percent_Identity=35.4545454545455, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI28571808, Length=380, Percent_Identity=31.5789473684211, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI28571809, Length=380, Percent_Identity=31.5789473684211, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17647335, Length=378, Percent_Identity=30.952380952381, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=34.0974212034384, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355559, Length=369, Percent_Identity=33.8753387533875, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=31.151832460733, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI19920478, Length=364, Percent_Identity=29.3956043956044, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=29.6296296296296, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI20130173, Length=479, Percent_Identity=27.1398747390397, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24668515, Length=364, Percent_Identity=28.5714285714286, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI24640164, Length=388, Percent_Identity=26.5463917525773, Blast_Score=124, Evalue=3e-28, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=30.8080808080808, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=30.8080808080808, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=25.2358490566038, Blast_Score=112, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 67988; Mature: 67856
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNKQKQLEEKDEDNFGEETSSKHDSKEIENNLKIISEDKLSAEKEDIEKGFACFGFNK CCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCHHHHHCCHHHCCHHH LILNSLENKGYKIPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPIIEKLENNKESN HHHHHHHCCCCCCCCCHHHHHCHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC AKVLVMTPTRELATQVADSFKSYSVESTNLRTLAIYGGTDFRNQISSLKRKTDVVVGTPG CEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEECCH RIMDHIRQGTFKINNINCLVLDEADEMLKMGFLEDIEWIIDKLPENKQMVLFSATMPNEI HHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH RNIAKKYLNDPAEILIKSVKKETQLITQRYINVQRHHKLEALKRILEITNEGVIIFVRTK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH LLTTSIAEALENSGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVATDVAARGLDVERIK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LVINYDFPFDKETYTHRIGRTGRAGRSGEAILFVNQREKHFLRNLENSTRNKIEEIEIPN EEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCHHEEECCC NKLINEKRMGKLISNLNEISLAQENNEEKKALMIDILDILREKYSMNESNIAMAAINLAI CCCCCHHHHHHHHHCHHHHEEHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE GNKSFFLNEDESWIYKQNNSDRNRSNRNGSGNNRMRNINRRNNYQNDSFETYKFNFGKMD CCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCEEEEECCCCCH RVRVSNIISSICNSTNINGRSIGKIQIFNEYSLVDLPKDLHGEVRNKLRKLRIRN HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASNKQKQLEEKDEDNFGEETSSKHDSKEIENNLKIISEDKLSAEKEDIEKGFACFGFNK CCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCHHHHHCCHHHCCHHH LILNSLENKGYKIPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPIIEKLENNKESN HHHHHHHCCCCCCCCCHHHHHCHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC AKVLVMTPTRELATQVADSFKSYSVESTNLRTLAIYGGTDFRNQISSLKRKTDVVVGTPG CEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEECCH RIMDHIRQGTFKINNINCLVLDEADEMLKMGFLEDIEWIIDKLPENKQMVLFSATMPNEI HHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH RNIAKKYLNDPAEILIKSVKKETQLITQRYINVQRHHKLEALKRILEITNEGVIIFVRTK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH LLTTSIAEALENSGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVATDVAARGLDVERIK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LVINYDFPFDKETYTHRIGRTGRAGRSGEAILFVNQREKHFLRNLENSTRNKIEEIEIPN EEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCHHEEECCC NKLINEKRMGKLISNLNEISLAQENNEEKKALMIDILDILREKYSMNESNIAMAAINLAI CCCCCHHHHHHHHHCHHHHEEHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE GNKSFFLNEDESWIYKQNNSDRNRSNRNGSGNNRMRNINRRNNYQNDSFETYKFNFGKMD CCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCEEEEECCCCCH RVRVSNIISSICNSTNINGRSIGKIQIFNEYSLVDLPKDLHGEVRNKLRKLRIRN HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]