| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is yceA [C]
Identifier: 123966418
GI number: 123966418
Start: 1041817
End: 1042749
Strand: Direct
Name: yceA [C]
Synonym: P9515_11851
Alternate gene names: 123966418
Gene position: 1041817-1042749 (Clockwise)
Preceding gene: 123966417
Following gene: 123966419
Centisome position: 61.13
GC content: 25.94
Gene sequence:
>933_bases ATGAAGAAGAATAATTATAAAATAGTTTCACTTTATTCTTTTTTCTCATTTCAAGAAAATTCAATAATTGAACTTAAGCA AAACTTGTTAAGGATTGAGAAAGAAAATGATCTTTCAGGCCTATTAATAATTGCTAGTGAGGGAATTAATGGAACCATCT GCGCTGAAGAGAAAATTATTGAGAATATCCTAAACTTAATAAAAAATATTGTTGGTAATAACCAATTAAATATAAAAGTT AGTTATTCAAAAGAGAAGATCTTCAAAAAATTAAAACTTAAAATAAAAAATGAAATTGTTACTATGGGCGTTCCTGAAAT AAATCCATTAGAAGACGCAGGAACTTATATTGATTCATTTAATTGGAATAAATTAATTAAAGATAAGGATACAATCGTAA TTGATACTAGAAATCATTATGAAGTATCTATAGGAAGTTTTAAAAAATCAATCAATCCAAATACTAAAAACTTTAGTGAG TTTCCTCAATGGGTTGATAATAATTTAGATAATCATTTAGGTAATGAAAATTCAAAAAATATAGCTATGTTTTGTACTGG AGGCATTAGATGCGAAAAAGCTACTACACTACTAAAAAACAAAGGCTACAAAAATATTTTCCATCTAAAAGGAGGAATCC TTAAATATCTCGAGGATATTTCAAAAGAAGAAAGTCTTTTTGAAGGAGAATGTTTTGTTTTTGATAAAAGAGTCGCATTA GATCACGAATTAAAAAAAGGTTCCTATTCAATTTGTCATGCATGTGGAATGCCAATTTCCATTGAAGATCAAACAAAAGT AGAATATATCGAAGGTATTCAATGTCATTTTTGTATTAACAAATTCACCGATGAAGATAGAAAAAGATTTGAAGAAAGGC AAAAACAGATAAATAAATTAAAAGTTAAAAATCAAGAAATTAGTAATAATTAA
Upstream 100 bases:
>100_bases CATCGAATCCATCTTTTCAAGATGACCGGAAACTACTTAAGGATGTAGGAGTCTTATTTAATAAAGATTTTGAATATTGT GATAAAACTGTCTCGACAGT
Downstream 100 bases:
>100_bases TTGATGAAAATTATGGAAGTTGAAGAATTACAAAACATAGCATATTCCTTAGGTCTAGTTATAAAAATACAAGTTAGAGA AACACTTGGATTATGTTTTT
Product: sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKKNNYKIVSLYSFFSFQENSIIELKQNLLRIEKENDLSGLLIIASEGINGTICAEEKIIENILNLIKNIVGNNQLNIKV SYSKEKIFKKLKLKIKNEIVTMGVPEINPLEDAGTYIDSFNWNKLIKDKDTIVIDTRNHYEVSIGSFKKSINPNTKNFSE FPQWVDNNLDNHLGNENSKNIAMFCTGGIRCEKATTLLKNKGYKNIFHLKGGILKYLEDISKEESLFEGECFVFDKRVAL DHELKKGSYSICHACGMPISIEDQTKVEYIEGIQCHFCINKFTDEDRKRFEERQKQINKLKVKNQEISNN
Sequences:
>Translated_310_residues MKKNNYKIVSLYSFFSFQENSIIELKQNLLRIEKENDLSGLLIIASEGINGTICAEEKIIENILNLIKNIVGNNQLNIKV SYSKEKIFKKLKLKIKNEIVTMGVPEINPLEDAGTYIDSFNWNKLIKDKDTIVIDTRNHYEVSIGSFKKSINPNTKNFSE FPQWVDNNLDNHLGNENSKNIAMFCTGGIRCEKATTLLKNKGYKNIFHLKGGILKYLEDISKEESLFEGECFVFDKRVAL DHELKKGSYSICHACGMPISIEDQTKVEYIEGIQCHFCINKFTDEDRKRFEERQKQINKLKVKNQEISNN >Mature_310_residues MKKNNYKIVSLYSFFSFQENSIIELKQNLLRIEKENDLSGLLIIASEGINGTICAEEKIIENILNLIKNIVGNNQLNIKV SYSKEKIFKKLKLKIKNEIVTMGVPEINPLEDAGTYIDSFNWNKLIKDKDTIVIDTRNHYEVSIGSFKKSINPNTKNFSE FPQWVDNNLDNHLGNENSKNIAMFCTGGIRCEKATTLLKNKGYKNIFHLKGGILKYLEDISKEESLFEGECFVFDKRVAL DHELKKGSYSICHACGMPISIEDQTKVEYIEGIQCHFCINKFTDEDRKRFEERQKQINKLKVKNQEISNN
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=236, Percent_Identity=35.5932203389831, Blast_Score=127, Evalue=1e-29, Organism=Escherichia coli, GI1787294, Length=286, Percent_Identity=29.3706293706294, Blast_Score=122, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1185_PROM5 (A2BX81)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001011499.1 - ProteinModelPortal: A2BX81 - SMR: A2BX81 - STRING: A2BX81 - GeneID: 4718948 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_11851 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: QVYHLKG - ProtClustDB: CLSK922102 - BioCyc: PMAR167542:P9515ORF_1239-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 35766; Mature: 35766
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 185-185
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNNYKIVSLYSFFSFQENSIIELKQNLLRIEKENDLSGLLIIASEGINGTICAEEKII CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEHHHHHH ENILNLIKNIVGNNQLNIKVSYSKEKIFKKLKLKIKNEIVTMGVPEINPLEDAGTYIDSF HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHCCHHCCC NWNKLIKDKDTIVIDTRNHYEVSIGSFKKSINPNTKNFSEFPQWVDNNLDNHLGNENSKN CCCHHCCCCCEEEEECCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCE IAMFCTGGIRCEKATTLLKNKGYKNIFHLKGGILKYLEDISKEESLFEGECFVFDKRVAL EEEEEECCEEEHHHHHHHHCCCCCEEEHHCCHHHHHHHHHHHHHHHCCCCEEEEECHHHH DHELKKGSYSICHACGMPISIEDQTKVEYIEGIQCHFCINKFTDEDRKRFEERQKQINKL HHHHCCCCCHHHHHCCCCCEECCCCHHHHHCCCEEEEEEHHCCCHHHHHHHHHHHHHHHH KVKNQEISNN HCCCCCCCCC >Mature Secondary Structure MKKNNYKIVSLYSFFSFQENSIIELKQNLLRIEKENDLSGLLIIASEGINGTICAEEKII CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEHHHHHH ENILNLIKNIVGNNQLNIKVSYSKEKIFKKLKLKIKNEIVTMGVPEINPLEDAGTYIDSF HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHCCHHCCC NWNKLIKDKDTIVIDTRNHYEVSIGSFKKSINPNTKNFSEFPQWVDNNLDNHLGNENSKN CCCHHCCCCCEEEEECCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCE IAMFCTGGIRCEKATTLLKNKGYKNIFHLKGGILKYLEDISKEESLFEGECFVFDKRVAL EEEEEECCEEEHHHHHHHHCCCCCEEEHHCCHHHHHHHHHHHHHHHCCCCEEEEECHHHH DHELKKGSYSICHACGMPISIEDQTKVEYIEGIQCHFCINKFTDEDRKRFEERQKQINKL HHHHCCCCCHHHHHCCCCCEECCCCHHHHHCCCEEEEEEHHCCCHHHHHHHHHHHHHHHH KVKNQEISNN HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA