Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is yuiD [H]

Identifier: 123966394

GI number: 123966394

Start: 1014716

End: 1015195

Strand: Direct

Name: yuiD [H]

Synonym: P9515_11611

Alternate gene names: 123966394

Gene position: 1014716-1015195 (Clockwise)

Preceding gene: 123966393

Following gene: 123966399

Centisome position: 59.54

GC content: 32.92

Gene sequence:

>480_bases
ATGTCAGAATTTTTAGCTTTCTTAGATAATTCAGTTCTTTTCTGGAGTTTAATATCTTGTTTATTAGCTCAATTCTTTAA
AATTATTTTTAATTTCTTTGCAACGGGAAAGTTTAGATTTGGAATCATGTTCGAAACTGGTGGGATGCCATCGAGTCATT
CTGCTCTAATAACTGGAGCAACTTCAGGAATAGGTCTTCAATTAGGATTTGATAGCCCAATATTTGCATTGGCGATTGCA
ATTTCACTAATTGTTATGTATGACGCTAGTGGGGTTAGAAAATCAGCTGGAATTCAAGCTGCTGAAATTAATAAACTATC
AAAAATACTAGATCCTAAATCGCAAGTTGATTTAAAAGAAGCTCTTGGTCATACAAAATCTGAAGTCATTGTAGGCAGTC
TTCTAGGCCCACTAATTACATTACCAGGAATAGTATATATAGGTTCTCCTCTCCATATATTAGATTTGATAATAAATTAG

Upstream 100 bases:

>100_bases
AAGCAAAAAAAGCAATTGAGCCTTGGGGTTTAGATGCACAATATTTAATCTCCTTAGCTGATTTCATTACAAATAGAGAT
AGGTAAAAAGTATTAAATTT

Downstream 100 bases:

>100_bases
GAATTCCTAGAATAATCATTTTGTGTAGCTTCTAGAAAGTTTCTTGCAGCTTCTGGGCAACTTGGTAAATGTAGGTGTAT
CCAACTTGCGTGTAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGATSGIGLQLGFDSPIFALAIA
ISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKEALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN

Sequences:

>Translated_159_residues
MSEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGATSGIGLQLGFDSPIFALAIA
ISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKEALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN
>Mature_158_residues
SEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGATSGIGLQLGFDSPIFALAIAI
SLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKEALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 17022; Mature: 16891

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGA
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEC
TSGIGLQLGFDSPIFALAIAISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKE
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHH
ALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN
HHCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCC
>Mature Secondary Structure 
SEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEC
TSGIGLQLGFDSPIFALAIAISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKE
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHH
ALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN
HHCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]