| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is yuiD [H]
Identifier: 123966394
GI number: 123966394
Start: 1014716
End: 1015195
Strand: Direct
Name: yuiD [H]
Synonym: P9515_11611
Alternate gene names: 123966394
Gene position: 1014716-1015195 (Clockwise)
Preceding gene: 123966393
Following gene: 123966399
Centisome position: 59.54
GC content: 32.92
Gene sequence:
>480_bases ATGTCAGAATTTTTAGCTTTCTTAGATAATTCAGTTCTTTTCTGGAGTTTAATATCTTGTTTATTAGCTCAATTCTTTAA AATTATTTTTAATTTCTTTGCAACGGGAAAGTTTAGATTTGGAATCATGTTCGAAACTGGTGGGATGCCATCGAGTCATT CTGCTCTAATAACTGGAGCAACTTCAGGAATAGGTCTTCAATTAGGATTTGATAGCCCAATATTTGCATTGGCGATTGCA ATTTCACTAATTGTTATGTATGACGCTAGTGGGGTTAGAAAATCAGCTGGAATTCAAGCTGCTGAAATTAATAAACTATC AAAAATACTAGATCCTAAATCGCAAGTTGATTTAAAAGAAGCTCTTGGTCATACAAAATCTGAAGTCATTGTAGGCAGTC TTCTAGGCCCACTAATTACATTACCAGGAATAGTATATATAGGTTCTCCTCTCCATATATTAGATTTGATAATAAATTAG
Upstream 100 bases:
>100_bases AAGCAAAAAAAGCAATTGAGCCTTGGGGTTTAGATGCACAATATTTAATCTCCTTAGCTGATTTCATTACAAATAGAGAT AGGTAAAAAGTATTAAATTT
Downstream 100 bases:
>100_bases GAATTCCTAGAATAATCATTTTGTGTAGCTTCTAGAAAGTTTCTTGCAGCTTCTGGGCAACTTGGTAAATGTAGGTGTAT CCAACTTGCGTGTAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGATSGIGLQLGFDSPIFALAIA ISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKEALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN
Sequences:
>Translated_159_residues MSEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGATSGIGLQLGFDSPIFALAIA ISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKEALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN >Mature_158_residues SEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGATSGIGLQLGFDSPIFALAIAI SLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKEALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 17022; Mature: 16891
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGA CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEC TSGIGLQLGFDSPIFALAIAISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKE CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHH ALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN HHCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCC >Mature Secondary Structure SEFLAFLDNSVLFWSLISCLLAQFFKIIFNFFATGKFRFGIMFETGGMPSSHSALITGA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEC TSGIGLQLGFDSPIFALAIAISLIVMYDASGVRKSAGIQAAEINKLSKILDPKSQVDLKE CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHH ALGHTKSEVIVGSLLGPLITLPGIVYIGSPLHILDLIIN HHCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]