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The map label for this gene is crtL [H]

Identifier: 123966387

GI number: 123966387

Start: 1006169

End: 1007380

Strand: Direct

Name: crtL [H]

Synonym: P9515_11541

Alternate gene names: 123966387

Gene position: 1006169-1007380 (Clockwise)

Preceding gene: 123966386

Following gene: 123966389

Centisome position: 59.04

GC content: 31.85

Gene sequence:

>1212_bases
ATGGAAATACTTGATATTTTAATTTTAGGTTCTGGACCTGCAGCATTATGTTTAGCCTCAGAATTAGCTAAACAAAATCT
TAATATAATGGGAATATCAACAAAATCTCCTTATGAAAAGTGGGAAAATACCTACGGGATTTGGGCCTCTGAATTAGAAG
AATTAGGTTTAGATTCTTTGTTATCTCATAGATGGTCAAAAACTTTGAGCTACTTTGGAGATGGATTGAATAAGAAAGGG
AATAATCCAACAAAACATTTTTATGATTATGGATTAATAAATCAGGAAGCTTTTCAGAATGAACTTTTAAAATCCTGCAA
AGATATTCAATGGTTGAATGAAACTGCAAAATTAATAAAATCAGAAAATAAACATTCTGAAGTAATTTGTTTTTCTGGAT
TAACACTAAAGGCAAGATTAGTAATTGATGCCAGTGGACACAATAGTAAATTTATTAAAAGGCCACTTTTAAAAGAAGTC
GCCCAGCAAGCTGCTTATGGGATAGTAGGGAAATTCTCTTCTCCTCCTGTAAATAAAGACCAATTTGTTTTGATGGATTT
TCGTTCTGACCACTTAAATAATGAAGAGTTGTTAGAGTCTCCCTCTTTTCTTTATGCAATGGATCTTGGAAGTGAAACTT
ATTTTGTTGAGGAGACATCACTGGCTAGTTATCCTGCTTTATCTCAGGATCATCTAAAAAAAAGACTTTTAAGTAGGTTA
AATAATAAAGGTGTAAAAATAGAAGAGATTTTCCATGAAGAAATTTGCTTATTCCCTATGAATTTGCCCTTACCATATAA
AAACCAATCAGTTCTTGGTTTTGGAGGTTCAGCAAGTATGGTTCATCCTGCTTCGGGATATATGATTGGATCATTATTAA
GAAGAGCTCCATTTCTTGCCAAAAAATTAGCAATCTTTCTGAAAGAACCACAATATAGTTCAAGAGAATTGGCGACAAGA
GGTTGGTCAGTCTTATGGCCATATGAATTAACTCAAAGACATAAACTTTATCAATATGGATTAAGGAGATTGATGAGCTT
TGATGAGAGTAGATTAAGAAGTTTCTTTTCTAATTTCTTCAAATTATCAACAAAAGAATGGGTAGGTTTTCTTACCAATA
CTCTTCCGTTACCAAAACTAATTTATGTAATGAGTAAAATGTTTATTAATTCACCTTTAAAAGTTAAGCTTGGGATGTTG
AAGATCAAATAA

Upstream 100 bases:

>100_bases
TCTGAAGTTGTGTTAGTTCCACATGAGCAAATCGATGATTCAGATCAATTAATGACTAAAGAAGAAGAGCTCTAACAAAG
TAGGAGATTAAACCGTTCCC

Downstream 100 bases:

>100_bases
GTTTTTTCACAATTGCCAATCTTCAATTCTTATCTCAGGAAATATATTGTCTTCTTCTTCAATATCTTCAATAAATTTGA
AGTCAACAATAGATCTTTTT

Product: putative lycopene beta cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MEILDILILGSGPAALCLASELAKQNLNIMGISTKSPYEKWENTYGIWASELEELGLDSLLSHRWSKTLSYFGDGLNKKG
NNPTKHFYDYGLINQEAFQNELLKSCKDIQWLNETAKLIKSENKHSEVICFSGLTLKARLVIDASGHNSKFIKRPLLKEV
AQQAAYGIVGKFSSPPVNKDQFVLMDFRSDHLNNEELLESPSFLYAMDLGSETYFVEETSLASYPALSQDHLKKRLLSRL
NNKGVKIEEIFHEEICLFPMNLPLPYKNQSVLGFGGSASMVHPASGYMIGSLLRRAPFLAKKLAIFLKEPQYSSRELATR
GWSVLWPYELTQRHKLYQYGLRRLMSFDESRLRSFFSNFFKLSTKEWVGFLTNTLPLPKLIYVMSKMFINSPLKVKLGML
KIK

Sequences:

>Translated_403_residues
MEILDILILGSGPAALCLASELAKQNLNIMGISTKSPYEKWENTYGIWASELEELGLDSLLSHRWSKTLSYFGDGLNKKG
NNPTKHFYDYGLINQEAFQNELLKSCKDIQWLNETAKLIKSENKHSEVICFSGLTLKARLVIDASGHNSKFIKRPLLKEV
AQQAAYGIVGKFSSPPVNKDQFVLMDFRSDHLNNEELLESPSFLYAMDLGSETYFVEETSLASYPALSQDHLKKRLLSRL
NNKGVKIEEIFHEEICLFPMNLPLPYKNQSVLGFGGSASMVHPASGYMIGSLLRRAPFLAKKLAIFLKEPQYSSRELATR
GWSVLWPYELTQRHKLYQYGLRRLMSFDESRLRSFFSNFFKLSTKEWVGFLTNTLPLPKLIYVMSKMFINSPLKVKLGML
KIK
>Mature_403_residues
MEILDILILGSGPAALCLASELAKQNLNIMGISTKSPYEKWENTYGIWASELEELGLDSLLSHRWSKTLSYFGDGLNKKG
NNPTKHFYDYGLINQEAFQNELLKSCKDIQWLNETAKLIKSENKHSEVICFSGLTLKARLVIDASGHNSKFIKRPLLKEV
AQQAAYGIVGKFSSPPVNKDQFVLMDFRSDHLNNEELLESPSFLYAMDLGSETYFVEETSLASYPALSQDHLKKRLLSRL
NNKGVKIEEIFHEEICLFPMNLPLPYKNQSVLGFGGSASMVHPASGYMIGSLLRRAPFLAKKLAIFLKEPQYSSRELATR
GWSVLWPYELTQRHKLYQYGLRRLMSFDESRLRSFFSNFFKLSTKEWVGFLTNTLPLPKLIYVMSKMFINSPLKVKLGML
KIK

Specific function: Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lycopene cyclase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR000103 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 45981; Mature: 45981

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILDILILGSGPAALCLASELAKQNLNIMGISTKSPYEKWENTYGIWASELEELGLDSL
CCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCHHHHHHCCHHHH
LSHRWSKTLSYFGDGLNKKGNNPTKHFYDYGLINQEAFQNELLKSCKDIQWLNETAKLIK
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SENKHSEVICFSGLTLKARLVIDASGHNSKFIKRPLLKEVAQQAAYGIVGKFSSPPVNKD
CCCCCCCEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QFVLMDFRSDHLNNEELLESPSFLYAMDLGSETYFVEETSLASYPALSQDHLKKRLLSRL
CEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
NNKGVKIEEIFHEEICLFPMNLPLPYKNQSVLGFGGSASMVHPASGYMIGSLLRRAPFLA
CCCCCCHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHCHHHH
KKLAIFLKEPQYSSRELATRGWSVLWPYELTQRHKLYQYGLRRLMSFDESRLRSFFSNFF
HHHHHHHCCCCCCCHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KLSTKEWVGFLTNTLPLPKLIYVMSKMFINSPLKVKLGMLKIK
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure
MEILDILILGSGPAALCLASELAKQNLNIMGISTKSPYEKWENTYGIWASELEELGLDSL
CCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCHHHHHHCCHHHH
LSHRWSKTLSYFGDGLNKKGNNPTKHFYDYGLINQEAFQNELLKSCKDIQWLNETAKLIK
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SENKHSEVICFSGLTLKARLVIDASGHNSKFIKRPLLKEVAQQAAYGIVGKFSSPPVNKD
CCCCCCCEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QFVLMDFRSDHLNNEELLESPSFLYAMDLGSETYFVEETSLASYPALSQDHLKKRLLSRL
CEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
NNKGVKIEEIFHEEICLFPMNLPLPYKNQSVLGFGGSASMVHPASGYMIGSLLRRAPFLA
CCCCCCHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHCHHHH
KKLAIFLKEPQYSSRELATRGWSVLWPYELTQRHKLYQYGLRRLMSFDESRLRSFFSNFF
HHHHHHHCCCCCCCHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KLSTKEWVGFLTNTLPLPKLIYVMSKMFINSPLKVKLGMLKIK
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7919981 [H]