| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966377
Identifier: 123966377
GI number: 123966377
Start: 996777
End: 997334
Strand: Reverse
Name: 123966377
Synonym: P9515_11441
Alternate gene names: NA
Gene position: 997334-996777 (Counterclockwise)
Preceding gene: 123966378
Following gene: 123966376
Centisome position: 58.52
GC content: 29.57
Gene sequence:
>558_bases ATGATCTACTCTGAAAAAAAGAACTTTGAGAGGAGAAATTTTAAGAATTTAATGATAAAAAGTTCTTCTATTGATAGAAG AAATGTAGCAATTAATGTGGACTTATATCTTGAGTCCTTAGTTAAGCAAGAGATGATAATTGATCATATTGGGATATATT GGCCTCTTAAAAATGAAGTTGATATAAGAAATCTTAATAATAAATATTCCGTAGCCTTGCCTAGATGTGAAAAAAATAAA GAACTCTGCTTTTGTTCATGGAATAATGAACAATTGACTAAAGATAATGAGGGAATACCCTCTCCTGATCCTTCTTTCAA ATTAAGTTATAAAAATATAAGTTTAATATTTGTACCTTGTCTTTCAGTCGATAAAAAGTTGACAAGACTAGGATATGGAG GTGGATATTTTGATAGATTTAGAGAAGATGAGAATTGGAGAACTATTCCATGTATTGGAGTATTAACTTCTAATTGTGTC AGTAATGATTTATTAACTAAAGCGGATTGGGATATCCCCCTATCTGGCTTTATTACAGAAAAAGAGATATTAGTCTAA
Upstream 100 bases:
>100_bases CTTAAATTTGAATTATGCACCAAAACCTGATGACTCCGCAGATGCACTGGCTATAGCTCTAACAAAATTAAATGAAGCTG GAATAAATTAGATTTAAATT
Downstream 100 bases:
>100_bases TGTGGAATTAATTTATAATTACTAGATTTATGTAAGTATGGAAAATAAACAAATTTATATTAATTTATTTAAGCAAGTTG AGAAGCTTAAGAATTCAAAG
Product: 5-formyltetrahydrofolate cyclo-ligase
Products: NA
Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase Family Protein; 5 10-Methenyltetrahydrofolate Synthetase
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIYSEKKNFERRNFKNLMIKSSSIDRRNVAINVDLYLESLVKQEMIIDHIGIYWPLKNEVDIRNLNNKYSVALPRCEKNK ELCFCSWNNEQLTKDNEGIPSPDPSFKLSYKNISLIFVPCLSVDKKLTRLGYGGGYFDRFREDENWRTIPCIGVLTSNCV SNDLLTKADWDIPLSGFITEKEILV
Sequences:
>Translated_185_residues MIYSEKKNFERRNFKNLMIKSSSIDRRNVAINVDLYLESLVKQEMIIDHIGIYWPLKNEVDIRNLNNKYSVALPRCEKNK ELCFCSWNNEQLTKDNEGIPSPDPSFKLSYKNISLIFVPCLSVDKKLTRLGYGGGYFDRFREDENWRTIPCIGVLTSNCV SNDLLTKADWDIPLSGFITEKEILV >Mature_185_residues MIYSEKKNFERRNFKNLMIKSSSIDRRNVAINVDLYLESLVKQEMIIDHIGIYWPLKNEVDIRNLNNKYSVALPRCEKNK ELCFCSWNNEQLTKDNEGIPSPDPSFKLSYKNISLIFVPCLSVDKKLTRLGYGGGYFDRFREDENWRTIPCIGVLTSNCV SNDLLTKADWDIPLSGFITEKEILV
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21525; Mature: 21525
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSEKKNFERRNFKNLMIKSSSIDRRNVAINVDLYLESLVKQEMIIDHIGIYWPLKNEV CCCCCCCCCCHHCHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCEEECCCCCE DIRNLNNKYSVALPRCEKNKELCFCSWNNEQLTKDNEGIPSPDPSFKLSYKNISLIFVPC EEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEC LSVDKKLTRLGYGGGYFDRFREDENWRTIPCIGVLTSNCVSNDLLTKADWDIPLSGFITE CCCCHHHHHHCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KEILV CEECC >Mature Secondary Structure MIYSEKKNFERRNFKNLMIKSSSIDRRNVAINVDLYLESLVKQEMIIDHIGIYWPLKNEV CCCCCCCCCCHHCHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCEEECCCCCE DIRNLNNKYSVALPRCEKNKELCFCSWNNEQLTKDNEGIPSPDPSFKLSYKNISLIFVPC EEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEC LSVDKKLTRLGYGGGYFDRFREDENWRTIPCIGVLTSNCVSNDLLTKADWDIPLSGFITE CCCCHHHHHHCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KEILV CEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA