| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966370
Identifier: 123966370
GI number: 123966370
Start: 989256
End: 990482
Strand: Reverse
Name: 123966370
Synonym: P9515_11371
Alternate gene names: NA
Gene position: 990482-989256 (Counterclockwise)
Preceding gene: 123966372
Following gene: 123966368
Centisome position: 58.12
GC content: 28.28
Gene sequence:
>1227_bases TTGGTCTCGAATAAATTTCTAATTAATAAACTTTGGTGGAATAAACTTCCTTTTCATTTAAGGTTAATTACTAAAATAAG ATTTTTTGCTTCATTTGGAGCAGGAGGAGTTATTTATTTAACATCCCTTATTTTTAATAATATTGGGTTGTCAGCAACTG AAATTGGCCTAGGTTTTACGATATCAGCGATTATAGGTACTTTAACAAGAATCATTACAGGTAATTTCTTAAATAAAACA TATAAAGTTCATTATCCCTTTGTTATTTCTTCATTAACAAGTATTGCTGCAGGAATTTTTCTAATTATTTCAAAAGATGC TTATTTTTATATCATTGGGCAAGCTTTTATTGGTGCAGCTGCAGGTATATATTGGCCAACAGCTGAGTTTGTAGTCCCAT ATTTTTGTCAAAATATTGATACTAGAAAAGCTTATGCTCTAGTAAGAAGTTCTGAGGCTTTGGGGATATTTCTAGGAGTA TTTATTGGTGGATTTATGAATGGTTTTATATATCTCAAATCTATTTTTATTAATGATATTTTTTGTATGATCACGATTAT TTTATTGGTTTTAAGAAATAAAGCTTCTATAAAAATTACTTTAGAAAAATCTCAAAAAAAAGCTTTAGATCTAATTAAAT TAAATCAAGAAAGGTGGAATAAAAATACAATCATAATAGTTTCATCTTTGGTTTTAATTACTACATCTCTTGCTTTAATT CAGGTTACACTTCCTCTTGATCTAGTTAAGGGCGGTATTTATAGAGAGGCTATAAATGAACAATTAATTAGCTTTATAAT TTCTTTTCAATTAATTCTACTATTAATCATACAATGGCCAATTGGTTCATGGATATCCAAAAAAGGAAAATTGTTTGGGT TGAAATTTAGCTTGATCAACTTTGCTTTTGCTTCACTTTTATTATTTATATCTAGTTATTTAAATATTTCGGCTTTTTAT TTTATATTTATTGCAATTATTCTTGTGGGTTTAGGCACCTCTTCTTTTCTTCCAACATCAACCGATGTTGTTTTTAGCAT AGCCCCTTCAAATAAAAAAGGTTATGCACTTGCACTTCTATCACAATGTTTTGCTATGGGCTATTTCTTTGGACCTTTAA TTTCTGGAGGGATTTTAGATCTTTTTGGTTATGCCTCTATAATTTGGGCCGCTATTTCATTCGTCTGTTTTTTAATGTTC GCAATAATATTTAAGAAATTATTTTAA
Upstream 100 bases:
>100_bases TCTTCAAACTTAATATTTATCTTTTCAGCGGCTTTTAAATTATTAGCTGAATAAAGACTAAAAAAACTTAAAAATAGTAC AAAAATCAATTTCAATTGTT
Downstream 100 bases:
>100_bases AAAACATTCGAAATATAATATTAATTATTTTCTATTTCCATGATTCTTCTCTCTCTAAGAAATAAGAAAAAGGGAGCAGA GAAGGCGAATGCTATTAAAA
Product: major facilitator superfamily multidrug-efflux transporter
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Permease Facilitator Superfamily; Transporter Facilitator Family Protein; Facilitator Superfamily Multidrug-Efflux Transporter-Like
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MVSNKFLINKLWWNKLPFHLRLITKIRFFASFGAGGVIYLTSLIFNNIGLSATEIGLGFTISAIIGTLTRIITGNFLNKT YKVHYPFVISSLTSIAAGIFLIISKDAYFYIIGQAFIGAAAGIYWPTAEFVVPYFCQNIDTRKAYALVRSSEALGIFLGV FIGGFMNGFIYLKSIFINDIFCMITIILLVLRNKASIKITLEKSQKKALDLIKLNQERWNKNTIIIVSSLVLITTSLALI QVTLPLDLVKGGIYREAINEQLISFIISFQLILLLIIQWPIGSWISKKGKLFGLKFSLINFAFASLLLFISSYLNISAFY FIFIAIILVGLGTSSFLPTSTDVVFSIAPSNKKGYALALLSQCFAMGYFFGPLISGGILDLFGYASIIWAAISFVCFLMF AIIFKKLF
Sequences:
>Translated_408_residues MVSNKFLINKLWWNKLPFHLRLITKIRFFASFGAGGVIYLTSLIFNNIGLSATEIGLGFTISAIIGTLTRIITGNFLNKT YKVHYPFVISSLTSIAAGIFLIISKDAYFYIIGQAFIGAAAGIYWPTAEFVVPYFCQNIDTRKAYALVRSSEALGIFLGV FIGGFMNGFIYLKSIFINDIFCMITIILLVLRNKASIKITLEKSQKKALDLIKLNQERWNKNTIIIVSSLVLITTSLALI QVTLPLDLVKGGIYREAINEQLISFIISFQLILLLIIQWPIGSWISKKGKLFGLKFSLINFAFASLLLFISSYLNISAFY FIFIAIILVGLGTSSFLPTSTDVVFSIAPSNKKGYALALLSQCFAMGYFFGPLISGGILDLFGYASIIWAAISFVCFLMF AIIFKKLF >Mature_408_residues MVSNKFLINKLWWNKLPFHLRLITKIRFFASFGAGGVIYLTSLIFNNIGLSATEIGLGFTISAIIGTLTRIITGNFLNKT YKVHYPFVISSLTSIAAGIFLIISKDAYFYIIGQAFIGAAAGIYWPTAEFVVPYFCQNIDTRKAYALVRSSEALGIFLGV FIGGFMNGFIYLKSIFINDIFCMITIILLVLRNKASIKITLEKSQKKALDLIKLNQERWNKNTIIIVSSLVLITTSLALI QVTLPLDLVKGGIYREAINEQLISFIISFQLILLLIIQWPIGSWISKKGKLFGLKFSLINFAFASLLLFISSYLNISAFY FIFIAIILVGLGTSSFLPTSTDVVFSIAPSNKKGYALALLSQCFAMGYFFGPLISGGILDLFGYASIIWAAISFVCFLMF AIIFKKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45414; Mature: 45414
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSNKFLINKLWWNKLPFHLRLITKIRFFASFGAGGVIYLTSLIFNNIGLSATEIGLGFT CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCHH ISAIIGTLTRIITGNFLNKTYKVHYPFVISSLTSIAAGIFLIISKDAYFYIIGQAFIGAA HHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHEEEEEECCCEEEEEHHHHHHHH AGIYWPTAEFVVPYFCQNIDTRKAYALVRSSEALGIFLGVFIGGFMNGFIYLKSIFINDI CCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCMITIILLVLRNKASIKITLEKSQKKALDLIKLNQERWNKNTIIIVSSLVLITTSLALI HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHHHH QVTLPLDLVKGGIYREAINEQLISFIISFQLILLLIIQWPIGSWISKKGKLFGLKFSLIN EEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEHHHHHH FAFASLLLFISSYLNISAFYFIFIAIILVGLGTSSFLPTSTDVVFSIAPSNKKGYALALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHH SQCFAMGYFFGPLISGGILDLFGYASIIWAAISFVCFLMFAIIFKKLF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MVSNKFLINKLWWNKLPFHLRLITKIRFFASFGAGGVIYLTSLIFNNIGLSATEIGLGFT CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCHH ISAIIGTLTRIITGNFLNKTYKVHYPFVISSLTSIAAGIFLIISKDAYFYIIGQAFIGAA HHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHEEEEEECCCEEEEEHHHHHHHH AGIYWPTAEFVVPYFCQNIDTRKAYALVRSSEALGIFLGVFIGGFMNGFIYLKSIFINDI CCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCMITIILLVLRNKASIKITLEKSQKKALDLIKLNQERWNKNTIIIVSSLVLITTSLALI HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHHHH QVTLPLDLVKGGIYREAINEQLISFIISFQLILLLIIQWPIGSWISKKGKLFGLKFSLIN EEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEHHHHHH FAFASLLLFISSYLNISAFYFIFIAIILVGLGTSSFLPTSTDVVFSIAPSNKKGYALALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHH SQCFAMGYFFGPLISGGILDLFGYASIIWAAISFVCFLMFAIIFKKLF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA