| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966368
Identifier: 123966368
GI number: 123966368
Start: 987956
End: 988825
Strand: Reverse
Name: 123966368
Synonym: P9515_11351
Alternate gene names: NA
Gene position: 988825-987956 (Counterclockwise)
Preceding gene: 123966370
Following gene: 123966367
Centisome position: 58.02
GC content: 31.03
Gene sequence:
>870_bases ATGTTTGAAACAAAAAATAATTTATTTAGAGATTATCAATTTCCAAAAGGGAACTTAAAGTTTGCTGTTATTGGTCATAT AGAATGGATAAATTTTATCGAAGTTGATCAACTGCCTAAGCCAGGTTTAATCTCTCATTCAAGAAAATCTCTAGAATATC CTGCGGGTGGAGGTGCAGTAATTGCTAAAAGACTTCGTGAACTAACCAAGAGCGAAGTTCATTTTTTTACATCTTTAGGA GATGATTTTTATGGCAATCAATGTTTAAACATTTTAGAAAATAATGGTATTAAATTACATGTTGCATGGCGTGATAAACC AACAAGAAAAGGTTTTAGTGTTATTGACTCTGAAGGCGAAAGATCTATTACTATTATTGGCGATAGATTAGCTCCAACGC ATAAAGATAATTTAAATTGGAGTATTCTTGATGAAATGGATGGGATTTTTATTACAGCAGCTGATAAGGAAATATTTAAA AAATCTAGGATTGTGAAATCGTTGTGTACTACTCCGAGAGCAGGTTTAGATATTATTAATGACTCTGGTATATTTTTAGA CGGATTAATTGGAAGTAATCTTGATCCGGGAGAAGTTTTTTCTCTAAATGAATTAAAATTAAATCCAAAATATATTATTA AAACGGAAGGAGAGAATGGTGGGATAGTATTCCCAGGAGGTAGATATAAAGCTATTGAAAATAAAAAGAATAAGGTTGAT TCATATGGATGTGGAGATTCTTTCGCCGCTGGTATCCTTTATGGATTATCATCAGGATGGAACATAGAAGAAAGTTTAAA TCTTGCTAAAATAATGGGTAAAAGCTGTAGTGAACATTTTGGACCTTATAAATATGATATTAAAATTTAA
Upstream 100 bases:
>100_bases CAAAGATAAATATAAGAAAGTACTTTTTTATTATCTTTTAAAATGTTTAATGAATTCATATGCAATTGATATTTATCATA ATAATAGTATTCAGTGAATT
Downstream 100 bases:
>100_bases TAAGGTGATTTTATGAAAAATTTTTTAAACAACAAAGGTTTATCTCTTATTGATTCAATTATTATTATATTTTTGTTAAT CTCTTCTTTGATTTTTGAAT
Product: putative pfkB family carbohydrate kinase
Products: ADP; D-ribose 5-phosphate
Alternate protein names: Ribokinase Family Sugar Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MFETKNNLFRDYQFPKGNLKFAVIGHIEWINFIEVDQLPKPGLISHSRKSLEYPAGGGAVIAKRLRELTKSEVHFFTSLG DDFYGNQCLNILENNGIKLHVAWRDKPTRKGFSVIDSEGERSITIIGDRLAPTHKDNLNWSILDEMDGIFITAADKEIFK KSRIVKSLCTTPRAGLDIINDSGIFLDGLIGSNLDPGEVFSLNELKLNPKYIIKTEGENGGIVFPGGRYKAIENKKNKVD SYGCGDSFAAGILYGLSSGWNIEESLNLAKIMGKSCSEHFGPYKYDIKI
Sequences:
>Translated_289_residues MFETKNNLFRDYQFPKGNLKFAVIGHIEWINFIEVDQLPKPGLISHSRKSLEYPAGGGAVIAKRLRELTKSEVHFFTSLG DDFYGNQCLNILENNGIKLHVAWRDKPTRKGFSVIDSEGERSITIIGDRLAPTHKDNLNWSILDEMDGIFITAADKEIFK KSRIVKSLCTTPRAGLDIINDSGIFLDGLIGSNLDPGEVFSLNELKLNPKYIIKTEGENGGIVFPGGRYKAIENKKNKVD SYGCGDSFAAGILYGLSSGWNIEESLNLAKIMGKSCSEHFGPYKYDIKI >Mature_289_residues MFETKNNLFRDYQFPKGNLKFAVIGHIEWINFIEVDQLPKPGLISHSRKSLEYPAGGGAVIAKRLRELTKSEVHFFTSLG DDFYGNQCLNILENNGIKLHVAWRDKPTRKGFSVIDSEGERSITIIGDRLAPTHKDNLNWSILDEMDGIFITAADKEIFK KSRIVKSLCTTPRAGLDIINDSGIFLDGLIGSNLDPGEVFSLNELKLNPKYIIKTEGENGGIVFPGGRYKAIENKKNKVD SYGCGDSFAAGILYGLSSGWNIEESLNLAKIMGKSCSEHFGPYKYDIKI
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15
Molecular weight: Translated: 32215; Mature: 32215
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETKNNLFRDYQFPKGNLKFAVIGHIEWINFIEVDQLPKPGLISHSRKSLEYPAGGGAV CCCCCCCCHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCHHH IAKRLRELTKSEVHFFTSLGDDFYGNQCLNILENNGIKLHVAWRDKPTRKGFSVIDSEGE HHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCC RSITIIGDRLAPTHKDNLNWSILDEMDGIFITAADKEIFKKSRIVKSLCTTPRAGLDIIN EEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEC DSGIFLDGLIGSNLDPGEVFSLNELKLNPKYIIKTEGENGGIVFPGGRYKAIENKKNKVD CCCEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCEEECCCCEEECCCCCCCCC SYGCGDSFAAGILYGLSSGWNIEESLNLAKIMGKSCSEHFGPYKYDIKI CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure MFETKNNLFRDYQFPKGNLKFAVIGHIEWINFIEVDQLPKPGLISHSRKSLEYPAGGGAV CCCCCCCCHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCHHH IAKRLRELTKSEVHFFTSLGDDFYGNQCLNILENNGIKLHVAWRDKPTRKGFSVIDSEGE HHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCC RSITIIGDRLAPTHKDNLNWSILDEMDGIFITAADKEIFKKSRIVKSLCTTPRAGLDIIN EEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEC DSGIFLDGLIGSNLDPGEVFSLNELKLNPKYIIKTEGENGGIVFPGGRYKAIENKKNKVD CCCEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCEEECCCCEEECCCCCCCCC SYGCGDSFAAGILYGLSSGWNIEESLNLAKIMGKSCSEHFGPYKYDIKI CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-ribose
Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA