| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966257
Identifier: 123966257
GI number: 123966257
Start: 916246
End: 916596
Strand: Direct
Name: 123966257
Synonym: P9515_10241
Alternate gene names: NA
Gene position: 916246-916596 (Clockwise)
Preceding gene: 123966256
Following gene: 123966258
Centisome position: 53.76
GC content: 41.31
Gene sequence:
>351_bases ATGAAATTATTCTTATTAGCACTTTTCAGTTTTTATCCATTTCTTCAAGTAAAAGCATCAACCCCTAAATCCGTAACATG TACCAGGACTGAGTATAGGGAAGAATATATTCCAGGGACAAAATCAAGCCCTGGATATGTTAGAAATTATGAAATTGACG TGGAAATTCCATGTGGTGGAGAGAAAGCCAATAATATTGATGACAATGACTGTAGTGAAGGGTCAGTAATAGGTGGTCTT CTTGGCGCTGGATTAGCTCTCTCTTCATCTAGGGGCAAAGACAGATTTTGGGCTGTTCCAGCAGGTGGAACCGCCGGTGC TCTTATCGGATGTCAGGTGGATGGTGGTTAA
Upstream 100 bases:
>100_bases ATAAACTTTATAATAGGCTCATTACTTGTTTTGTTAGGAACTATTATTTCTACTAGCAAAATTATGAAAAAGATTTAAAA TATAAAAAAAAGTATTTTTA
Downstream 100 bases:
>100_bases TTGATTAGTTGGGTAAAGGGAAAATTAGTAAGTTCATGGCAAACTAATAATAAATTTTATATTCTAATAAATTGTCAGGG ATTAGGCTACGAAATTCAGA
Product: cAMP phosphodiesterases class-II
Products: NA
Alternate protein names: CAMP Phosphodiesterase Class-II-Like; CAMP Phosphodiesterases Class-II
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKLFLLALFSFYPFLQVKASTPKSVTCTRTEYREEYIPGTKSSPGYVRNYEIDVEIPCGGEKANNIDDNDCSEGSVIGGL LGAGLALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
Sequences:
>Translated_116_residues MKLFLLALFSFYPFLQVKASTPKSVTCTRTEYREEYIPGTKSSPGYVRNYEIDVEIPCGGEKANNIDDNDCSEGSVIGGL LGAGLALSSSRGKDRFWAVPAGGTAGALIGCQVDGG >Mature_116_residues MKLFLLALFSFYPFLQVKASTPKSVTCTRTEYREEYIPGTKSSPGYVRNYEIDVEIPCGGEKANNIDDNDCSEGSVIGGL LGAGLALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12274; Mature: 12274
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFLLALFSFYPFLQVKASTPKSVTCTRTEYREEYIPGTKSSPGYVRNYEIDVEIPCGG CCHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCC EKANNIDDNDCSEGSVIGGLLGAGLALSSSRGKDRFWAVPAGGTAGALIGCQVDGG CCCCCCCCCCCCCCCEEHHHHHCCEEECCCCCCCEEEEECCCCCCCEEEEEEECCC >Mature Secondary Structure MKLFLLALFSFYPFLQVKASTPKSVTCTRTEYREEYIPGTKSSPGYVRNYEIDVEIPCGG CCHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCC EKANNIDDNDCSEGSVIGGLLGAGLALSSSRGKDRFWAVPAGGTAGALIGCQVDGG CCCCCCCCCCCCCCCEEHHHHHCCEEECCCCCCCEEEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA