| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966198
Identifier: 123966198
GI number: 123966198
Start: 860473
End: 860961
Strand: Reverse
Name: 123966198
Synonym: P9515_09651
Alternate gene names: NA
Gene position: 860961-860473 (Counterclockwise)
Preceding gene: 123966200
Following gene: 123966197
Centisome position: 50.52
GC content: 32.31
Gene sequence:
>489_bases ATGACATTAAATCTTGAAGCAAAAAAAATCTTATTAAGAAAAATTCCACATGGATTGTTTATTTGCGGAGTAAGAGATGA AGAGAAAAATGAAGTAAATGGTTTTACAGCAAGTTGGGTTACACAAGGATCCTTCACTCCTCCCCTTGTTGTAATGGCAG TTAGAGCAGAAGGATCTAGTCATGAAATAATTAAAAATACTGGTAAGTTTTCATTAAATGTTCTAAAAAGTGATCAAAAG GATTTAGCCGCAGTTTTTTTTAAACCACAAAAAGCACTAGGTGGAAGATTTGAATCCGTGGAATTTAATTTGGGAGAATA TGGGTTACCGATTTTAGTAGATAGTGTTGGCGGTGTTGAATGTAAAGTTGTAGGTAATGTTATCTATGGTGATCATACTG TTTTTGTTGGAGAAGTTTTAACAGCATATTTAAATAATGATGTGGAATCTTTAAATTTAAATAGTACAGGATGGAATTAT GGAGGTTAG
Upstream 100 bases:
>100_bases TTTGTTAAAGGATCAAATGTACCTGGGTAAAGTATTTTCATAACTTGATTATGATTAGAAAGGATATTTAGTTAAAATAA AATTATTAATTAAATTAATT
Downstream 100 bases:
>100_bases AAACTATAGATGAATAATCCTTCAACTAAAGTATTGGATAAAAAATATAATTTTAAAATAGAATATAAACTTATCAATAA TAAGCAATTATTAAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTLNLEAKKILLRKIPHGLFICGVRDEEKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSSHEIIKNTGKFSLNVLKSDQK DLAAVFFKPQKALGGRFESVEFNLGEYGLPILVDSVGGVECKVVGNVIYGDHTVFVGEVLTAYLNNDVESLNLNSTGWNY GG
Sequences:
>Translated_162_residues MTLNLEAKKILLRKIPHGLFICGVRDEEKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSSHEIIKNTGKFSLNVLKSDQK DLAAVFFKPQKALGGRFESVEFNLGEYGLPILVDSVGGVECKVVGNVIYGDHTVFVGEVLTAYLNNDVESLNLNSTGWNY GG >Mature_161_residues TLNLEAKKILLRKIPHGLFICGVRDEEKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSSHEIIKNTGKFSLNVLKSDQKD LAAVFFKPQKALGGRFESVEFNLGEYGLPILVDSVGGVECKVVGNVIYGDHTVFVGEVLTAYLNNDVESLNLNSTGWNYG G
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 17636; Mature: 17505
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNLEAKKILLRKIPHGLFICGVRDEEKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSS CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC HEIIKNTGKFSLNVLKSDQKDLAAVFFKPQKALGGRFESVEFNLGEYGLPILVDSVGGVE CHHEECCCCEEEEEECCCCCCEEEEEECCCHHHCCCEEEEEECCCCCCCEEEEECCCCEE CKVVGNVIYGDHTVFVGEVLTAYLNNDVESLNLNSTGWNYGG EEEEEEEEECCCEEHHHHHHHHHHCCCCCEEECCCCCCCCCC >Mature Secondary Structure TLNLEAKKILLRKIPHGLFICGVRDEEKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSS CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC HEIIKNTGKFSLNVLKSDQKDLAAVFFKPQKALGGRFESVEFNLGEYGLPILVDSVGGVE CHHEECCCCEEEEEECCCCCCEEEEEECCCHHHCCCEEEEEECCCCCCCEEEEECCCCEE CKVVGNVIYGDHTVFVGEVLTAYLNNDVESLNLNSTGWNYGG EEEEEEEEECCCEEHHHHHHHHHHCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]