| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is metG [H]
Identifier: 123966181
GI number: 123966181
Start: 839411
End: 840946
Strand: Reverse
Name: metG [H]
Synonym: P9515_09481
Alternate gene names: 123966181
Gene position: 840946-839411 (Counterclockwise)
Preceding gene: 123966182
Following gene: 123966180
Centisome position: 49.35
GC content: 29.1
Gene sequence:
>1536_bases ATGAGCTTTGTAATTACTACCCCATTATATTATGTAAATGATAAGCCTCACTTAGGGAGCATTTATACTACTTTAATTTG TGATTCCATAGCAAGGTTCAAGAGACTATCAGGCGATAATGTAATTTTCATTACTGGAGTTGATGAACATGGTTTAAAGA TTCAAAGAACTGCTAGTAATAAAGGTGTAGATCCTCAATCTCATTGTGATGAGATTTCTGATATTTTTAAACAAAATTGG AAATCTTGGGACATAACAAATAATAAATTTGTAAGAACCAGTTCTCAAAATCATGAATCTATAGTTAATGAATTTTACAA CAGAGTAAAAGCTTCTGGAGATATCTATATGGGAGTCCAAAAAGGATGGTATTGCGTCGGTTGTGAAGAATTTAAAGAAA ATCCAGAAAATCTATCATCATATAAATGTCCAATTCATCAAAAAAACTTAGAATGGAAAAATGAAGAAAATCTTTTTTTT AGATTATCTAAATATCAATCACAAATCGAAGAACTTATTAATGAGCCTTCATTTATTTATCCCAAAGAAAGAAGAAATGA AATTATCAATTTCGTAAGCAAAGGTTTAAAAGATTTCTCAGTATCTAGAACAAATGTATCTTGGGGAATATCAGTACCCG ATACAAAGGATCATACTTTTTACGTATGGTTTGATGCTTTACTTGGCTATGTAAGTGCTATATGCCCAAATATGAGTGAT CCATCATTGGAATCATCTATTAATAATGGATGGCCTGCTGACATACATTTTATAGGTAAGGATATCCTAAGGTTTCATGC TGTTTATTGGCCAGCGATGCTTCTTTCAGCTGGTATGGATGTACCTAAAAGAGTATTTGGTCATGGCTTCTTAACAAGAG AAGGTCAAAAAATGGGGAAAAGCTTAGGAAATGTATTAGATCCAAATCTTTTATTATCTAAATATGGTAAGGAAGCAGTT AGATGGTATCTTTTAAAGGATATTTCATTGGGTAGTGATGGTGATTTTCAAAATAAAAGATTTGTAGACATTATTAATAA TGATTTGGCTAACACAATTGGAAATTTATTAAATAGAACATCTTCAATGTCTAGAAAGTGGTTTGACAATAAAGTTCCAG ATACTTATGAGTTAATCATTGATAATACATTGCAATTATGCTGCAATGAAGCAGTAGAAAAATTTATAAATCATTTTAAT TTATATGAGTTAGATTTAGCAGCTAATGTTATACTTAATCTTGCAATTAATACAAATTTATATCTTAACGAAAAACAGCC TTGGAAATTAATTAAAGATGAAAATAATATTTCTATTGTATGTAATATAATTTATGATGTATTAGAAAGTACAAGAATTA TTGGCTTATTATTATTACCAATATTACCGGATTTATCCTCCAAAATTAACATGCAATTGGGATCTCTATATAATAAAAAT GAGTCTTGGAATGATCAATTGAATTGGGGTTTATTGAAATCTAAATCAAATTTACCAGCTCCATATCCAATTATTGAAAA ACTAGAATATGAATAG
Upstream 100 bases:
>100_bases AAAATGATAATAATCTTTTAGAATTTATTCACTAGCTATAAATAAACTCTATATCATAATATTTAGATATTATATTTGTT ACTATTAGAAAAAAGATATT
Downstream 100 bases:
>100_bases ATTTTATAAACTTTTTTTAATAACTACAATAATTATTGGAGGATGTAAAACTCGAGATATAGAAGATAAAATAACTAACC AAAGTATTAATAGTTTAAAT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSFVITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASNKGVDPQSHCDEISDIFKQNW KSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQKGWYCVGCEEFKENPENLSSYKCPIHQKNLEWKNEENLFF RLSKYQSQIEELINEPSFIYPKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSD PSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGKSLGNVLDPNLLLSKYGKEAV RWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRTSSMSRKWFDNKVPDTYELIIDNTLQLCCNEAVEKFINHFN LYELDLAANVILNLAINTNLYLNEKQPWKLIKDENNISIVCNIIYDVLESTRIIGLLLLPILPDLSSKINMQLGSLYNKN ESWNDQLNWGLLKSKSNLPAPYPIIEKLEYE
Sequences:
>Translated_511_residues MSFVITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASNKGVDPQSHCDEISDIFKQNW KSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQKGWYCVGCEEFKENPENLSSYKCPIHQKNLEWKNEENLFF RLSKYQSQIEELINEPSFIYPKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSD PSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGKSLGNVLDPNLLLSKYGKEAV RWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRTSSMSRKWFDNKVPDTYELIIDNTLQLCCNEAVEKFINHFN LYELDLAANVILNLAINTNLYLNEKQPWKLIKDENNISIVCNIIYDVLESTRIIGLLLLPILPDLSSKINMQLGSLYNKN ESWNDQLNWGLLKSKSNLPAPYPIIEKLEYE >Mature_510_residues SFVITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASNKGVDPQSHCDEISDIFKQNWK SWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQKGWYCVGCEEFKENPENLSSYKCPIHQKNLEWKNEENLFFR LSKYQSQIEELINEPSFIYPKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSDP SLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGKSLGNVLDPNLLLSKYGKEAVR WYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRTSSMSRKWFDNKVPDTYELIIDNTLQLCCNEAVEKFINHFNL YELDLAANVILNLAINTNLYLNEKQPWKLIKDENNISIVCNIIYDVLESTRIIGLLLLPILPDLSSKINMQLGSLYNKNE SWNDQLNWGLLKSKSNLPAPYPIIEKLEYE
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=501, Percent_Identity=33.1337325349301, Blast_Score=298, Evalue=1e-80, Organism=Homo sapiens, GI14043022, Length=511, Percent_Identity=24.853228962818, Blast_Score=143, Evalue=4e-34, Organism=Escherichia coli, GI1788432, Length=532, Percent_Identity=25.5639097744361, Blast_Score=180, Evalue=2e-46, Organism=Caenorhabditis elegans, GI212645096, Length=504, Percent_Identity=31.1507936507937, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71992781, Length=396, Percent_Identity=30.5555555555556, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17540794, Length=525, Percent_Identity=26.2857142857143, Blast_Score=144, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321610, Length=509, Percent_Identity=32.6129666011788, Blast_Score=256, Evalue=6e-69, Organism=Saccharomyces cerevisiae, GI6321704, Length=518, Percent_Identity=25.8687258687259, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI21358483, Length=502, Percent_Identity=31.8725099601594, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI24655311, Length=546, Percent_Identity=25.0915750915751, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 58758; Mature: 58626
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASN CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCC KGVDPQSHCDEISDIFKQNWKSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQ CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEC KGWYCVGCEEFKENPENLSSYKCPIHQKNLEWKNEENLFFRLSKYQSQIEELINEPSFIY CCEEEEECHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEC PKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSD CHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCCC PSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGK CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHH SLGNVLDPNLLLSKYGKEAVRWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRT HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SSMSRKWFDNKVPDTYELIIDNTLQLCCNEAVEKFINHFNLYELDLAANVILNLAINTNL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHEEEEECCEE YLNEKQPWKLIKDENNISIVCNIIYDVLESTRIIGLLLLPILPDLSSKINMQLGSLYNKN EECCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC ESWNDQLNWGLLKSKSNLPAPYPIIEKLEYE CCCCCCCCCCEEECCCCCCCCCHHHHHCCCC >Mature Secondary Structure SFVITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASN CEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCC KGVDPQSHCDEISDIFKQNWKSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQ CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEC KGWYCVGCEEFKENPENLSSYKCPIHQKNLEWKNEENLFFRLSKYQSQIEELINEPSFIY CCEEEEECHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEC PKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSD CHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCCC PSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGK CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHH SLGNVLDPNLLLSKYGKEAVRWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRT HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SSMSRKWFDNKVPDTYELIIDNTLQLCCNEAVEKFINHFNLYELDLAANVILNLAINTNL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHEEEEECCEE YLNEKQPWKLIKDENNISIVCNIIYDVLESTRIIGLLLLPILPDLSSKINMQLGSLYNKN EECCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC ESWNDQLNWGLLKSKSNLPAPYPIIEKLEYE CCCCCCCCCCEEECCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]