| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966157
Identifier: 123966157
GI number: 123966157
Start: 828529
End: 828756
Strand: Reverse
Name: 123966157
Synonym: P9515_09241
Alternate gene names: NA
Gene position: 828756-828529 (Counterclockwise)
Preceding gene: 123966158
Following gene: 123966156
Centisome position: 48.63
GC content: 28.07
Gene sequence:
>228_bases ATGAGTGGTACATCCAATAAACCATTAGCTGTTTTTTTAGGTTCTTCAACTGCTCTTGTTTTAGCAAGTTTAATAGGAGC ATTAGCAGGTGGGTCAATCTCAAATTTTGTACCCGAAATTATATTGAAATCAATAGCATCATTAACTTTTTTTATTCTTG GGATTAGAATTTTTATAAATTCATTCATTTCAAATGAAGCTTATAATAAAGAAAGGAATATTAATTAG
Upstream 100 bases:
>100_bases TAGACCTTTCATATAAATGATCTTAAGCTTAATTTTGTCGACATTCCTAACAATATTTATTGCTGAACTTGGAGACAAAA CGCAGTTAGCCACTTTAACA
Downstream 100 bases:
>100_bases TTTTTGATTAAAAAGAAAGATATAATGTAAACGTATCTCTACACATCAGTTGAATATCTAGGGTCATTATGTTTTCAACC TCCTCAATAATTGATAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSGTSNKPLAVFLGSSTALVLASLIGALAGGSISNFVPEIILKSIASLTFFILGIRIFINSFISNEAYNKERNIN
Sequences:
>Translated_75_residues MSGTSNKPLAVFLGSSTALVLASLIGALAGGSISNFVPEIILKSIASLTFFILGIRIFINSFISNEAYNKERNIN >Mature_74_residues SGTSNKPLAVFLGSSTALVLASLIGALAGGSISNFVPEIILKSIASLTFFILGIRIFINSFISNEAYNKERNIN
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7934; Mature: 7803
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTSNKPLAVFLGSSTALVLASLIGALAGGSISNFVPEIILKSIASLTFFILGIRIFIN CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFISNEAYNKERNIN HHHHHHHCCCCCCCC >Mature Secondary Structure SGTSNKPLAVFLGSSTALVLASLIGALAGGSISNFVPEIILKSIASLTFFILGIRIFIN CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFISNEAYNKERNIN HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA