| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is terC [H]
Identifier: 123966149
GI number: 123966149
Start: 818917
End: 819627
Strand: Direct
Name: terC [H]
Synonym: P9515_09161
Alternate gene names: 123966149
Gene position: 818917-819627 (Clockwise)
Preceding gene: 123966146
Following gene: 123966161
Centisome position: 48.05
GC content: 28.27
Gene sequence:
>711_bases ATGGATTCAGCCGCAATAAATTCTTTTATTCCAACGCTAGATCAAGTTGATAGTTGGTCTGAGATTCTTACACTTCTACC AATTTTAATTATTTTAGAATTGCTACTTTCGGCTGACAACGCTATAGCTTTGGCTTCACTCACTAAATCTCTTGATAGTC CAGAATTAAGATCTAAGGCCTTAAATATAGGTATCACTATTTCTTTATTATTTAGAATATTTCTTATTCTATTATCTAAT ATTCTTCTGAAATTTATCATAATTCGAATTTTTGCAGGACTGTATCTTATTTATTTATTTATTTCAAATGTTTTTTTAAG TAATGAAACCGATTTACAAAATTCTGACAATGACAAAACAAATATTAATTTCAAATTTTTAAAGATTGTAGCTTTGCTAT CTTTTACTGATTTTGCTTTTTCAATAGACAGTATTACAACAGCTGTTGCTATAAGTGATCAATATATTCTTATTATTTTT GGAGCAATTATAGGTGTATTAGCATTACGATTTACCTCCGGCATCTTTCTTAAACTTTTAGAGAAATTTTCAAGGCTAGA AACTGCCGGTTATATCGCTATTCTTATTGTTGGGATTAAGCTTCTTCTAAATACATTAATTACAGAGACAATTCTTCCTG ATTATTATTTTTATATTTTGATATTAATCTCCTTCCTTTGGGGTTTGTCCAAAAGGGAGATAATAACTTAA
Upstream 100 bases:
>100_bases TAACTAATTAAGGAGTTTAAACTCATTTATTTCTAATTAACTTGATTACTACTTAAGGTTATATTATATTATATTTTATA AAGATTGTGAATAATAATAG
Downstream 100 bases:
>100_bases TCTGAGAATTTTTCTCCTATAAGAGGATTTAATTGTTGTAAAAGCTGCTTTTGCTTAGATATATTTTTACCCTCTAGTTT TGCCTCTAATAAAAGAATTG
Product: tellurium resistance protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MDSAAINSFIPTLDQVDSWSEILTLLPILIILELLLSADNAIALASLTKSLDSPELRSKALNIGITISLLFRIFLILLSN ILLKFIIIRIFAGLYLIYLFISNVFLSNETDLQNSDNDKTNINFKFLKIVALLSFTDFAFSIDSITTAVAISDQYILIIF GAIIGVLALRFTSGIFLKLLEKFSRLETAGYIAILIVGIKLLLNTLITETILPDYYFYILILISFLWGLSKREIIT
Sequences:
>Translated_236_residues MDSAAINSFIPTLDQVDSWSEILTLLPILIILELLLSADNAIALASLTKSLDSPELRSKALNIGITISLLFRIFLILLSN ILLKFIIIRIFAGLYLIYLFISNVFLSNETDLQNSDNDKTNINFKFLKIVALLSFTDFAFSIDSITTAVAISDQYILIIF GAIIGVLALRFTSGIFLKLLEKFSRLETAGYIAILIVGIKLLLNTLITETILPDYYFYILILISFLWGLSKREIIT >Mature_236_residues MDSAAINSFIPTLDQVDSWSEILTLLPILIILELLLSADNAIALASLTKSLDSPELRSKALNIGITISLLFRIFLILLSN ILLKFIIIRIFAGLYLIYLFISNVFLSNETDLQNSDNDKTNINFKFLKIVALLSFTDFAFSIDSITTAVAISDQYILIIF GAIIGVLALRFTSGIFLKLLEKFSRLETAGYIAILIVGIKLLLNTLITETILPDYYFYILILISFLWGLSKREIIT
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022493 - InterPro: IPR005496 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 26440; Mature: 26440
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSAAINSFIPTLDQVDSWSEILTLLPILIILELLLSADNAIALASLTKSLDSPELRSKA CCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH LNIGITISLLFRIFLILLSNILLKFIIIRIFAGLYLIYLFISNVFLSNETDLQNSDNDKT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NINFKFLKIVALLSFTDFAFSIDSITTAVAISDQYILIIFGAIIGVLALRFTSGIFLKLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EKFSRLETAGYIAILIVGIKLLLNTLITETILPDYYFYILILISFLWGLSKREIIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDSAAINSFIPTLDQVDSWSEILTLLPILIILELLLSADNAIALASLTKSLDSPELRSKA CCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH LNIGITISLLFRIFLILLSNILLKFIIIRIFAGLYLIYLFISNVFLSNETDLQNSDNDKT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NINFKFLKIVALLSFTDFAFSIDSITTAVAISDQYILIIFGAIIGVLALRFTSGIFLKLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EKFSRLETAGYIAILIVGIKLLLNTLITETILPDYYFYILILISFLWGLSKREIIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]