Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is ybcJ [C]

Identifier: 123966136

GI number: 123966136

Start: 804616

End: 804864

Strand: Direct

Name: ybcJ [C]

Synonym: P9515_09031

Alternate gene names: 123966136

Gene position: 804616-804864 (Clockwise)

Preceding gene: 123966133

Following gene: 123966137

Centisome position: 47.21

GC content: 26.51

Gene sequence:

>249_bases
GTGGAATTAATCGCAAAATATTCTGTTAATGTATTTCTTTTACTTTATCAACAGCTGAGGTTTTATAAAACAATGAAATT
AGATCAATTTTTAAAATGGCATAACTTTGTTTCTTCTGGGGGCGAAGCAAAAATCTTTATAAAATCTGGTCAGGTTAAAG
TTAATGGAGAAATAGAAACAAAACGAGGAAGAAAATTAGTCAAAGGAGATAAAGTTATGTTTCTAAAAAATGAATTAATT
TTTGAATAA

Upstream 100 bases:

>100_bases
ATTAATTTTCCTGCTACAAAAGCTAATATTGGCCAACATACTACATAAACAATCATGCATACAAACCCTTTAAGAAATCT
ATTAATATAGGGAGTGATTG

Downstream 100 bases:

>100_bases
TTAGCCTATTAGCTGCAAGTTATATTAGTATTATTTTCTTGGACAATATATTTTGAGAAAATCTGTAATCGCCGGTAATT
GGAAGATGCACATGACTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: S4 Domain-Containing Protein

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MELIAKYSVNVFLLLYQQLRFYKTMKLDQFLKWHNFVSSGGEAKIFIKSGQVKVNGEIETKRGRKLVKGDKVMFLKNELI
FE

Sequences:

>Translated_82_residues
MELIAKYSVNVFLLLYQQLRFYKTMKLDQFLKWHNFVSSGGEAKIFIKSGQVKVNGEIETKRGRKLVKGDKVMFLKNELI
FE
>Mature_82_residues
MELIAKYSVNVFLLLYQQLRFYKTMKLDQFLKWHNFVSSGGEAKIFIKSGQVKVNGEIETKRGRKLVKGDKVMFLKNELI
FE

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9662; Mature: 9662

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIAKYSVNVFLLLYQQLRFYKTMKLDQFLKWHNFVSSGGEAKIFIKSGQVKVNGEIET
CCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCEEEC
KRGRKLVKGDKVMFLKNELIFE
CCCCEECCCCEEEEEECCCCCC
>Mature Secondary Structure
MELIAKYSVNVFLLLYQQLRFYKTMKLDQFLKWHNFVSSGGEAKIFIKSGQVKVNGEIET
CCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCEEEC
KRGRKLVKGDKVMFLKNELIFE
CCCCEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA