| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966069
Identifier: 123966069
GI number: 123966069
Start: 757222
End: 758133
Strand: Reverse
Name: 123966069
Synonym: P9515_08361
Alternate gene names: NA
Gene position: 758133-757222 (Counterclockwise)
Preceding gene: 123966070
Following gene: 123966068
Centisome position: 44.49
GC content: 32.02
Gene sequence:
>912_bases ATGTTTGTAAGTAAATTTAAAAATTTAATCTATTGTTTCTTGATATTTTTTCCATTATCGCTTGGGATTAGTTCATGTTC TCAAAATAAGAAATTAATTTCTAGCGATAAAGAAATTTCTTCTGATATTATTTTTCAAATAAATGCAGTCGCTGCCCTAG GACAACTCTCACCATCTGGCGAGATAAGGAAATTAGCAGCGCCAATAAGTCAATTTGGCTCTTCTCCTCGTTTGTCTCAG CTGTTAGTGAGTGAGGGTGATTTTGTCAAAAAAGGATCAGTTCTAGCTGTTTTTGAAAATAGGGAGAAATTAATCTCAGA TCTCGAAAGAAAAAATAATCTTATCAAGACAAACAATCTTGAGATTTCATTAAAAAAAGATCAAATTAAAAGATATGAAT TAGCAGTAGAAAAATCTGCATATTCTTTAGTTCAACTTTCTCAGAGAAAAGACGAGTTACTTAAATTACAAAAACAAAAA ATAGTAAATATTGGCGATAAAAATAATATTGAGATAGATCTTTTTAATTCTCAACTTAGAAGTCCAATTGATGGATTTAT CCTCGCGGTTAATACACGAGTTGGTGAAAGACCCAACAATGAAGGAATCCTCGAGGTTGGTTCAAGTCAGAACATGGAGG CTCTCATAGAAGTATATGAATCTGATATTAATAGAGTGTTTGTTTCTCAAAAAGTTGAATTAAGTAGTGAGAATGGAGGA TTTTCAAAGATTTTAAAAGGCGAGGTAATAAGAATTAGTCCTCAAGTAAAACAGAGAAAAGTTTTATCTACAGATCCTAC GGGCGATGCTGATGCTCGTATTATTGAGGTTCTAGTGAAGCTTAACGATGAATCGATAAAATTAGTGAGAAACTACACAG GTATGAAGGTTATTGCTAAATTTCTACCTTAA
Upstream 100 bases:
>100_bases GACAACAAATGAAAAATGAAAAAACAAGTTTGGTTCTACTGAAGTATTTCGACAAAAAATGGGTAGATGAATATATCAAA AAAGTACTATTTGATTTTTG
Downstream 100 bases:
>100_bases TGAAATTTTCTCTCATAAAATTCCGGAAAATTCCTTTAGCTTGGTTGTTGCTTACTAGACAACCTCTTAGGTTAATAGTT GCAATTGCAGGAATTAGCTT
Product: ABC transporter
Products: NA
Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; DevB-Like Secretion Protein; Secretion Protein HlyD; ABC-Transporter Membrane Fusion Protein; Secretion Protein HlyD Family Protein; Auxiliary Transport Protein MFP Family; Transporter MFP Family; Membrane Fusion Protein Family Protein; Glycolipid ABC Transporter Membrane Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; ABC Transporter Component; ABC Transporter Component-Like; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MFVSKFKNLIYCFLIFFPLSLGISSCSQNKKLISSDKEISSDIIFQINAVAALGQLSPSGEIRKLAAPISQFGSSPRLSQ LLVSEGDFVKKGSVLAVFENREKLISDLERKNNLIKTNNLEISLKKDQIKRYELAVEKSAYSLVQLSQRKDELLKLQKQK IVNIGDKNNIEIDLFNSQLRSPIDGFILAVNTRVGERPNNEGILEVGSSQNMEALIEVYESDINRVFVSQKVELSSENGG FSKILKGEVIRISPQVKQRKVLSTDPTGDADARIIEVLVKLNDESIKLVRNYTGMKVIAKFLP
Sequences:
>Translated_303_residues MFVSKFKNLIYCFLIFFPLSLGISSCSQNKKLISSDKEISSDIIFQINAVAALGQLSPSGEIRKLAAPISQFGSSPRLSQ LLVSEGDFVKKGSVLAVFENREKLISDLERKNNLIKTNNLEISLKKDQIKRYELAVEKSAYSLVQLSQRKDELLKLQKQK IVNIGDKNNIEIDLFNSQLRSPIDGFILAVNTRVGERPNNEGILEVGSSQNMEALIEVYESDINRVFVSQKVELSSENGG FSKILKGEVIRISPQVKQRKVLSTDPTGDADARIIEVLVKLNDESIKLVRNYTGMKVIAKFLP >Mature_303_residues MFVSKFKNLIYCFLIFFPLSLGISSCSQNKKLISSDKEISSDIIFQINAVAALGQLSPSGEIRKLAAPISQFGSSPRLSQ LLVSEGDFVKKGSVLAVFENREKLISDLERKNNLIKTNNLEISLKKDQIKRYELAVEKSAYSLVQLSQRKDELLKLQKQK IVNIGDKNNIEIDLFNSQLRSPIDGFILAVNTRVGERPNNEGILEVGSSQNMEALIEVYESDINRVFVSQKVELSSENGG FSKILKGEVIRISPQVKQRKVLSTDPTGDADARIIEVLVKLNDESIKLVRNYTGMKVIAKFLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33867; Mature: 33867
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVSKFKNLIYCFLIFFPLSLGISSCSQNKKLISSDKEISSDIIFQINAVAALGQLSPSG CCHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCCHHHCCHHEEEEHHHHHHHCCCCCC EIRKLAAPISQFGSSPRLSQLLVSEGDFVKKGSVLAVFENREKLISDLERKNNLIKTNNL HHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCEEEEECCHHHHHHHHHHCCCCEEECCE EISLKKDQIKRYELAVEKSAYSLVQLSQRKDELLKLQKQKIVNIGDKNNIEIDLFNSQLR EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHC SPIDGFILAVNTRVGERPNNEGILEVGSSQNMEALIEVYESDINRVFVSQKVELSSENGG CCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCC FSKILKGEVIRISPQVKQRKVLSTDPTGDADARIIEVLVKLNDESIKLVRNYTGMKVIAK HHHHHCCCEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH FLP HCC >Mature Secondary Structure MFVSKFKNLIYCFLIFFPLSLGISSCSQNKKLISSDKEISSDIIFQINAVAALGQLSPSG CCHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCCHHHCCHHEEEEHHHHHHHCCCCCC EIRKLAAPISQFGSSPRLSQLLVSEGDFVKKGSVLAVFENREKLISDLERKNNLIKTNNL HHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCEEEEECCHHHHHHHHHHCCCCEEECCE EISLKKDQIKRYELAVEKSAYSLVQLSQRKDELLKLQKQKIVNIGDKNNIEIDLFNSQLR EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHC SPIDGFILAVNTRVGERPNNEGILEVGSSQNMEALIEVYESDINRVFVSQKVELSSENGG CCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCC FSKILKGEVIRISPQVKQRKVLSTDPTGDADARIIEVLVKLNDESIKLVRNYTGMKVIAK HHHHHCCCEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH FLP HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA