Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966068

Identifier: 123966068

GI number: 123966068

Start: 756050

End: 757222

Strand: Reverse

Name: 123966068

Synonym: P9515_08351

Alternate gene names: NA

Gene position: 757222-756050 (Counterclockwise)

Preceding gene: 123966069

Following gene: 123966067

Centisome position: 44.43

GC content: 32.99

Gene sequence:

>1173_bases
ATGAAATTTTCTCTCATAAAATTCCGGAAAATTCCTTTAGCTTGGTTGTTGCTTACTAGACAACCTCTTAGGTTAATAGT
TGCAATTGCAGGAATTAGCTTCGCTGGGATTCTAATGTTTATGCAATTAGGATTTAGAGATGGTTTATTTGATACAAGTG
TAACTATTCACAAACTTTTGGATGCTGATCTTGTTTTGATAAGTCCTAGATCAAAAAGTTCTATAAGTATGAGCGGCTTT
CCAAAAAGAAGATTAATTCAAACTTTAGCTTTAGAAGATGTAGAAAAAACTGCACCTGTTAACTTAACTTATCTTCTGTG
GAGAAATCCAGAAAATCTAAAAACAAGATCAATATTAGCTTTGGGATTTAATCCTGCAGATTCTCTTCTTCTTGATAGTG
GATTTTCAAGAAAGTCAGATAAACTAAAAAATCCAGGGAGAGTACTTTTTGATAAACTATCAAGACCAGAGTTTGGCCCC
ATAGAGGATTGGTTTCTTTCAGGAAAGAAAGTAGAAACAGAAGTTGCAGGTAAAAGAGTAATAGTGGAGGGCCTTGTAGA
GCTAGGTCCATCCTTTGGAGCAGATGGAAATTTAATCACAAGTAGAGAAACATTTTTAAGACTATTCCCAGCAAATCCAA
AAGGAAGCATTGAAATTGGTTTAGTGAAACTTCGAAATGGCTCAAACCCAATTTTGGTATCTGAAATATTAAATAAATCT
CTCCCTAATGATGTTCGTGTTTTAACAAAAAATCAATTTATTGAATTTGAAAAAAATTATTGGAGAAATAGTACTGCAAT
TGGTTTTATATTTAGTTTGGGAGCTTTAATGGGTTTTGTAGTTGGTTGCGTTGTTGTTTATCAAATTCTTTATAGTGATG
TCACTGACCATCTTCCTGAATATGCAACTTTATTAGCTATGGGATATAGACTAAAATCTCTTTTCTTTGTGGTTGCACGA
GAAGGCTTTTTATTGGCTTTATTTGGTTATCTACCCGCTTATTTTTCAGGGCAAATACTTTATTCAGTTGTCAGAAATTC
TACAAAGCTTCCAATAGTGATGGATGCTCATAAAACAATTTTAATTTTTGTTTTAATTTTAATTATGTGTATGGGGTCAG
CTGGAATTGCTATGCGTAAATTAGTTGATGCGGACCCTGCAGAAATATTTTAA

Upstream 100 bases:

>100_bases
ATGCTCGTATTATTGAGGTTCTAGTGAAGCTTAACGATGAATCGATAAAATTAGTGAGAAACTACACAGGTATGAAGGTT
ATTGCTAAATTTCTACCTTA

Downstream 100 bases:

>100_bases
CTAAATAATTTATATGCACTCAAGCTTAAATAAAAATTTAAAAACTGTTTCTATCAATAATTTGAGTCATTTTTACGGAA
AAAATGAAAATAAGAAACAA

Product: ABC-transporter, membrane spanning component

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF
PKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILALGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGP
IEDWFLSGKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS
LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR
EGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTILIFVLILIMCMGSAGIAMRKLVDADPAEIF

Sequences:

>Translated_390_residues
MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF
PKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILALGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGP
IEDWFLSGKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS
LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR
EGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTILIFVLILIMCMGSAGIAMRKLVDADPAEIF
>Mature_390_residues
MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF
PKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILALGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGP
IEDWFLSGKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS
LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR
EGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTILIFVLILIMCMGSAGIAMRKLVDADPAEIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43505; Mature: 43505

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL
CCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DADLVLISPRSKSSISMSGFPKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILA
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEE
LGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGPIEDWFLSGKKVETEVAGKRV
ECCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHCCCCEEEHHHHCHHH
IVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS
HHHHHHHCCCCCCCCCCEEECHHHEEEEECCCCCCCEEEEEEEEECCCCCEEHHHHHCCC
LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE
CCCCCEEEEHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
LIFVLILIMCMGSAGIAMRKLVDADPAEIF
HHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL
CCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DADLVLISPRSKSSISMSGFPKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILA
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEE
LGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGPIEDWFLSGKKVETEVAGKRV
ECCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHCCCCEEEHHHHCHHH
IVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS
HHHHHHHCCCCCCCCCCEEECHHHEEEEECCCCCCCEEEEEEEEECCCCCEEHHHHHCCC
LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE
CCCCCEEEEHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
LIFVLILIMCMGSAGIAMRKLVDADPAEIF
HHHHHHHHHHCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA