| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966068
Identifier: 123966068
GI number: 123966068
Start: 756050
End: 757222
Strand: Reverse
Name: 123966068
Synonym: P9515_08351
Alternate gene names: NA
Gene position: 757222-756050 (Counterclockwise)
Preceding gene: 123966069
Following gene: 123966067
Centisome position: 44.43
GC content: 32.99
Gene sequence:
>1173_bases ATGAAATTTTCTCTCATAAAATTCCGGAAAATTCCTTTAGCTTGGTTGTTGCTTACTAGACAACCTCTTAGGTTAATAGT TGCAATTGCAGGAATTAGCTTCGCTGGGATTCTAATGTTTATGCAATTAGGATTTAGAGATGGTTTATTTGATACAAGTG TAACTATTCACAAACTTTTGGATGCTGATCTTGTTTTGATAAGTCCTAGATCAAAAAGTTCTATAAGTATGAGCGGCTTT CCAAAAAGAAGATTAATTCAAACTTTAGCTTTAGAAGATGTAGAAAAAACTGCACCTGTTAACTTAACTTATCTTCTGTG GAGAAATCCAGAAAATCTAAAAACAAGATCAATATTAGCTTTGGGATTTAATCCTGCAGATTCTCTTCTTCTTGATAGTG GATTTTCAAGAAAGTCAGATAAACTAAAAAATCCAGGGAGAGTACTTTTTGATAAACTATCAAGACCAGAGTTTGGCCCC ATAGAGGATTGGTTTCTTTCAGGAAAGAAAGTAGAAACAGAAGTTGCAGGTAAAAGAGTAATAGTGGAGGGCCTTGTAGA GCTAGGTCCATCCTTTGGAGCAGATGGAAATTTAATCACAAGTAGAGAAACATTTTTAAGACTATTCCCAGCAAATCCAA AAGGAAGCATTGAAATTGGTTTAGTGAAACTTCGAAATGGCTCAAACCCAATTTTGGTATCTGAAATATTAAATAAATCT CTCCCTAATGATGTTCGTGTTTTAACAAAAAATCAATTTATTGAATTTGAAAAAAATTATTGGAGAAATAGTACTGCAAT TGGTTTTATATTTAGTTTGGGAGCTTTAATGGGTTTTGTAGTTGGTTGCGTTGTTGTTTATCAAATTCTTTATAGTGATG TCACTGACCATCTTCCTGAATATGCAACTTTATTAGCTATGGGATATAGACTAAAATCTCTTTTCTTTGTGGTTGCACGA GAAGGCTTTTTATTGGCTTTATTTGGTTATCTACCCGCTTATTTTTCAGGGCAAATACTTTATTCAGTTGTCAGAAATTC TACAAAGCTTCCAATAGTGATGGATGCTCATAAAACAATTTTAATTTTTGTTTTAATTTTAATTATGTGTATGGGGTCAG CTGGAATTGCTATGCGTAAATTAGTTGATGCGGACCCTGCAGAAATATTTTAA
Upstream 100 bases:
>100_bases ATGCTCGTATTATTGAGGTTCTAGTGAAGCTTAACGATGAATCGATAAAATTAGTGAGAAACTACACAGGTATGAAGGTT ATTGCTAAATTTCTACCTTA
Downstream 100 bases:
>100_bases CTAAATAATTTATATGCACTCAAGCTTAAATAAAAATTTAAAAACTGTTTCTATCAATAATTTGAGTCATTTTTACGGAA AAAATGAAAATAAGAAACAA
Product: ABC-transporter, membrane spanning component
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILALGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGP IEDWFLSGKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTILIFVLILIMCMGSAGIAMRKLVDADPAEIF
Sequences:
>Translated_390_residues MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILALGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGP IEDWFLSGKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTILIFVLILIMCMGSAGIAMRKLVDADPAEIF >Mature_390_residues MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILALGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGP IEDWFLSGKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTILIFVLILIMCMGSAGIAMRKLVDADPAEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43505; Mature: 43505
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL CCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH DADLVLISPRSKSSISMSGFPKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILA CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEE LGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGPIEDWFLSGKKVETEVAGKRV ECCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHCCCCEEEHHHHCHHH IVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS HHHHHHHCCCCCCCCCCEEECHHHEEEEECCCCCCCEEEEEEEEECCCCCEEHHHHHCCC LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE CCCCCEEEEHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH LIFVLILIMCMGSAGIAMRKLVDADPAEIF HHHHHHHHHHCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MKFSLIKFRKIPLAWLLLTRQPLRLIVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL CCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH DADLVLISPRSKSSISMSGFPKRRLIQTLALEDVEKTAPVNLTYLLWRNPENLKTRSILA CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEE LGFNPADSLLLDSGFSRKSDKLKNPGRVLFDKLSRPEFGPIEDWFLSGKKVETEVAGKRV ECCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHCCCCEEEHHHHCHHH IVEGLVELGPSFGADGNLITSRETFLRLFPANPKGSIEIGLVKLRNGSNPILVSEILNKS HHHHHHHCCCCCCCCCCEEECHHHEEEEECCCCCCCEEEEEEEEECCCCCEEHHHHHCCC LPNDVRVLTKNQFIEFEKNYWRNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE CCCCCEEEEHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGQILYSVVRNSTKLPIVMDAHKTI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH LIFVLILIMCMGSAGIAMRKLVDADPAEIF HHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA