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The map label for this gene is vanY [H]

Identifier: 123966057

GI number: 123966057

Start: 742083

End: 742814

Strand: Reverse

Name: vanY [H]

Synonym: P9515_08221

Alternate gene names: 123966057

Gene position: 742814-742083 (Counterclockwise)

Preceding gene: 123966059

Following gene: 123966056

Centisome position: 43.59

GC content: 29.78

Gene sequence:

>732_bases
TTGGACCGTAAAGAAGAATTAAAAGAGTCATTTGATATCCCAGTCGCTGAGAGAAAATATACAAATGAAGTAAATCCAAA
ATATAAAATATATATATTTTTAGTAATTCCAGTCTTATTATTACTTTTTTCTATCGCTGGGTTGAGATTGAACAAAAATT
TAAATCAAAGTCGATTAATAAATATCAATACTAAAAATACTAATAATTTTGATGATAGTATCTTAGGCCATCTCCCATAT
AAGGAAATTTCGAAAGAAAAATTGGTTGTCATTGAACCAAATATTGAAGTTCATATCGACATGAGTGAATCACTTCTTAA
AATGAAAAATGATGCTATGAAAGATGGTATATATTTGGTCTTTCTTAGTGGATATAGATCAATAAATCTACAGAAAGATA
TTTTTTATTCTTTAAAATCCATGAGAAATCAGATTGCTGCAGAAAGGGCTAGGGTTTCAGCACCACCAGGATATTCTGAG
CATAGTACAGGATTCGCTATTGATATTGGAGATGCCGATAAAAGAGAAACAGACTTTGAAGTTGAATTTGAAAATACGAA
TGCTTTCAGATGGCTTAAAAACAACGCAGCTAAGTATCACTTCAAATTATCATTCAATAAAAATAATAAAAATGTTGATT
ATGAGCCTTGGCACTGGCGATATGAAGGGTCGATCGAAGCACTTAAAGTTTTTGAAGCATCAAATAGGAATTTAAAAAAA
CAACTTAATTAA

Upstream 100 bases:

>100_bases
AAAGTATCCTATTAAAAAGCTACATCAAATTCTTTATAAAAGTACATTTCGTAAATTAATAGTTAATATCGAAATATGTT
TTTCTAATAAACTTTTAATC

Downstream 100 bases:

>100_bases
AAACTAATAACAATTTTTATATATGATTTTCAAAGTCTTACAGATAAATTCTTCAGAATAAGCATTCTTTGAGTTAGCCT
TAATATAATCAACTTTTGGT

Product: putative carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDRKEELKESFDIPVAERKYTNEVNPKYKIYIFLVIPVLLLLFSIAGLRLNKNLNQSRLININTKNTNNFDDSILGHLPY
KEISKEKLVVIEPNIEVHIDMSESLLKMKNDAMKDGIYLVFLSGYRSINLQKDIFYSLKSMRNQIAAERARVSAPPGYSE
HSTGFAIDIGDADKRETDFEVEFENTNAFRWLKNNAAKYHFKLSFNKNNKNVDYEPWHWRYEGSIEALKVFEASNRNLKK
QLN

Sequences:

>Translated_243_residues
MDRKEELKESFDIPVAERKYTNEVNPKYKIYIFLVIPVLLLLFSIAGLRLNKNLNQSRLININTKNTNNFDDSILGHLPY
KEISKEKLVVIEPNIEVHIDMSESLLKMKNDAMKDGIYLVFLSGYRSINLQKDIFYSLKSMRNQIAAERARVSAPPGYSE
HSTGFAIDIGDADKRETDFEVEFENTNAFRWLKNNAAKYHFKLSFNKNNKNVDYEPWHWRYEGSIEALKVFEASNRNLKK
QLN
>Mature_243_residues
MDRKEELKESFDIPVAERKYTNEVNPKYKIYIFLVIPVLLLLFSIAGLRLNKNLNQSRLININTKNTNNFDDSILGHLPY
KEISKEKLVVIEPNIEVHIDMSESLLKMKNDAMKDGIYLVFLSGYRSINLQKDIFYSLKSMRNQIAAERARVSAPPGYSE
HSTGFAIDIGDADKRETDFEVEFENTNAFRWLKNNAAKYHFKLSFNKNNKNVDYEPWHWRYEGSIEALKVFEASNRNLKK
QLN

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 28392; Mature: 28392

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKEELKESFDIPVAERKYTNEVNPKYKIYIFLVIPVLLLLFSIAGLRLNKNLNQSRLI
CCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEECCCCCCCEEE
NINTKNTNNFDDSILGHLPYKEISKEKLVVIEPNIEVHIDMSESLLKMKNDAMKDGIYLV
EEECCCCCCCCCHHHCCCCHHHCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHCCEEEE
FLSGYRSINLQKDIFYSLKSMRNQIAAERARVSAPPGYSEHSTGFAIDIGDADKRETDFE
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEE
VEFENTNAFRWLKNNAAKYHFKLSFNKNNKNVDYEPWHWRYEGSIEALKVFEASNRNLKK
EEECCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEECCCCCHHH
QLN
HCC
>Mature Secondary Structure
MDRKEELKESFDIPVAERKYTNEVNPKYKIYIFLVIPVLLLLFSIAGLRLNKNLNQSRLI
CCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEECCCCCCCEEE
NINTKNTNNFDDSILGHLPYKEISKEKLVVIEPNIEVHIDMSESLLKMKNDAMKDGIYLV
EEECCCCCCCCCHHHCCCCHHHCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHCCEEEE
FLSGYRSINLQKDIFYSLKSMRNQIAAERARVSAPPGYSEHSTGFAIDIGDADKRETDFE
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEE
VEFENTNAFRWLKNNAAKYHFKLSFNKNNKNVDYEPWHWRYEGSIEALKVFEASNRNLKK
EEECCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEECCCCCHHH
QLN
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]