| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966046
Identifier: 123966046
GI number: 123966046
Start: 730468
End: 731016
Strand: Reverse
Name: 123966046
Synonym: P9515_08111
Alternate gene names: NA
Gene position: 731016-730468 (Counterclockwise)
Preceding gene: 123966047
Following gene: 123966045
Centisome position: 42.9
GC content: 31.33
Gene sequence:
>549_bases ATGAGTAAGAAAAAAGTATTATTCCAAAAACAAAAATTTGAAGGATGGAAAACCCTAAATGATACGGTAATGGGCGGATC AAGCTCAGCTTATTGTGAAAATATAAAGTCTGGATTGCTTTTAAAGGGAAACATCATAGAGAAAGCTGGTGGTTTTGTTA GCTGCAGATCTTCGATATACAAACCTACACTAGATATAAAGGAGTATGAATCTTTTGAATTAAAAATAGATGGTCAAGGA AGAACTTTTAAATTTGCAGTTGCATGTGAAGATGACCTCCTAGGACTTACTGAATTTATTCCTGGTGGTCTCAGATGGAT AAAATCATTTCCCACTAAAAAATTTGGGACAACCGATATTCAAATTCCTTTTAATTCTCTTAAGCCATCAATTAGAGCTA ATAAGGTAAGTTTTCCATTCAAATTTAAACCATCAAAAATCAAAAGATTACAGCTTCTTCATTCAAAATTTGGAGATGAT GGTCTTCCAAATAATGAATTTAAGTCTGGTCCAATAAAAATTTTAATTAAATCAATCAGTGTTATTTGA
Upstream 100 bases:
>100_bases TTAAATCAAGTAACCAGATATCAATATTTTGTGATGAAGAATCTTCAAAAGAATTATTAACTTAGTTAAAGTCTTTATAG AAACTTTAGTTAATAAATTA
Downstream 100 bases:
>100_bases AAATTTGCAAGATGAATTGAATAGATTAATTGCTAAATCTGCTGATTTAACAAATAAACCTTTTTTGCACTCAGTTGTAA AGATTAATGGAGAATATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKKKVLFQKQKFEGWKTLNDTVMGGSSSAYCENIKSGLLLKGNIIEKAGGFVSCRSSIYKPTLDIKEYESFELKIDGQG RTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTDIQIPFNSLKPSIRANKVSFPFKFKPSKIKRLQLLHSKFGDD GLPNNEFKSGPIKILIKSISVI
Sequences:
>Translated_182_residues MSKKKVLFQKQKFEGWKTLNDTVMGGSSSAYCENIKSGLLLKGNIIEKAGGFVSCRSSIYKPTLDIKEYESFELKIDGQG RTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTDIQIPFNSLKPSIRANKVSFPFKFKPSKIKRLQLLHSKFGDD GLPNNEFKSGPIKILIKSISVI >Mature_181_residues SKKKVLFQKQKFEGWKTLNDTVMGGSSSAYCENIKSGLLLKGNIIEKAGGFVSCRSSIYKPTLDIKEYESFELKIDGQGR TFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTDIQIPFNSLKPSIRANKVSFPFKFKPSKIKRLQLLHSKFGDDG LPNNEFKSGPIKILIKSISVI
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20393; Mature: 20262
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKVLFQKQKFEGWKTLNDTVMGGSSSAYCENIKSGLLLKGNIIEKAGGFVSCRSSIY CCCCCHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHCCEEEECCCHHHCCCEEEHHHHHC KPTLDIKEYESFELKIDGQGRTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTDI CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCEEE QIPFNSLKPSIRANKVSFPFKFKPSKIKRLQLLHSKFGDDGLPNNEFKSGPIKILIKSIS EEEHHHCCCCCCCCEECCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEHHH VI CC >Mature Secondary Structure SKKKVLFQKQKFEGWKTLNDTVMGGSSSAYCENIKSGLLLKGNIIEKAGGFVSCRSSIY CCCCHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHCCEEEECCCHHHCCCEEEHHHHHC KPTLDIKEYESFELKIDGQGRTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTDI CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCEEE QIPFNSLKPSIRANKVSFPFKFKPSKIKRLQLLHSKFGDDGLPNNEFKSGPIKILIKSIS EEEHHHCCCCCCCCEECCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEHHH VI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA