Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966045

Identifier: 123966045

GI number: 123966045

Start: 730092

End: 730478

Strand: Reverse

Name: 123966045

Synonym: P9515_08101

Alternate gene names: NA

Gene position: 730478-730092 (Counterclockwise)

Preceding gene: 123966046

Following gene: 123966041

Centisome position: 42.86

GC content: 26.87

Gene sequence:

>387_bases
GTGTTATTTGAAAATTTGCAAGATGAATTGAATAGATTAATTGCTAAATCTGCTGATTTAACAAATAAACCTTTTTTGCA
CTCAGTTGTAAAGATTAATGGAGAATATGAAATAAATAATGAGGATATTGATTTAACTGTAAATATTCTATGTAGAGATA
ATGAGGGTAAAAGATTAGAAATCTATGATCTTGAGTTAGAACTTTTTAGATCAAATAGGGAATTAGTTTTAGTTATTTCG
AAGCTTAACTATCCCGATGAACCTATTTTGTGGAGTGGTATAAAAACAATATGGATGAACAGTAATAGTGGGAAGAAATG
TTTACCTCCAAAATATAGTTCAAAATTGGAGAATCTTGCTACTAGAATAAAAAATTTTATTACTTAA

Upstream 100 bases:

>100_bases
ATCAAAAGATTACAGCTTCTTCATTCAAAATTTGGAGATGATGGTCTTCCAAATAATGAATTTAAGTCTGGTCCAATAAA
AATTTTAATTAAATCAATCA

Downstream 100 bases:

>100_bases
AAAAATTTATTTTTTGGATATTATTTTTCCAGATCTGTAACTGCACCTAAGCTTGAAGTACTTACAATTCTTGAATATTT
TGAAAGTACACCTTTCTTAT

Product: coat protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLFENLQDELNRLIAKSADLTNKPFLHSVVKINGEYEINNEDIDLTVNILCRDNEGKRLEIYDLELELFRSNRELVLVIS
KLNYPDEPILWSGIKTIWMNSNSGKKCLPPKYSSKLENLATRIKNFIT

Sequences:

>Translated_128_residues
MLFENLQDELNRLIAKSADLTNKPFLHSVVKINGEYEINNEDIDLTVNILCRDNEGKRLEIYDLELELFRSNRELVLVIS
KLNYPDEPILWSGIKTIWMNSNSGKKCLPPKYSSKLENLATRIKNFIT
>Mature_128_residues
MLFENLQDELNRLIAKSADLTNKPFLHSVVKINGEYEINNEDIDLTVNILCRDNEGKRLEIYDLELELFRSNRELVLVIS
KLNYPDEPILWSGIKTIWMNSNSGKKCLPPKYSSKLENLATRIKNFIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14885; Mature: 14885

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFENLQDELNRLIAKSADLTNKPFLHSVVKINGEYEINNEDIDLTVNILCRDNEGKRLE
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEECCCCEEEEEEEEEECCCCCEEE
IYDLELELFRSNRELVLVISKLNYPDEPILWSGIKTIWMNSNSGKKCLPPKYSSKLENLA
EEEEEEEEECCCCEEEEEEEECCCCCCCEEECCEEEEEEECCCCCCCCCCCHHHHHHHHH
TRIKNFIT
HHHHHHCC
>Mature Secondary Structure
MLFENLQDELNRLIAKSADLTNKPFLHSVVKINGEYEINNEDIDLTVNILCRDNEGKRLE
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEECCCCEEEEEEEEEECCCCCEEE
IYDLELELFRSNRELVLVISKLNYPDEPILWSGIKTIWMNSNSGKKCLPPKYSSKLENLA
EEEEEEEEECCCCEEEEEEEECCCCCCCEEECCEEEEEEECCCCCCCCCCCHHHHHHHHH
TRIKNFIT
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA