| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965959
Identifier: 123965959
GI number: 123965959
Start: 655011
End: 655283
Strand: Direct
Name: 123965959
Synonym: P9515_07241
Alternate gene names: NA
Gene position: 655011-655283 (Clockwise)
Preceding gene: 123965958
Following gene: 123965960
Centisome position: 38.44
GC content: 26.37
Gene sequence:
>273_bases ATGGCTCGAGCAAGATCTAATTTTAGATTTAGTCAATGTATTTTGTTTATAACTTTAGGAATGATTTTAGGAGTGGGAGC TATTTGGCCAGGATTTCTCACCGAAAAAGGAAGAAAATGTTTTTTAAAAATAATACAAGATAGTACTGACGGTAATGTAA CTATTGGAACTCTCTTTTCAATATCTCCAAATTATCTTATTAAAATTCATAATGAAAAAAATAAATATAACAAAATATTG TTAATAGGTGATTTTTGTTTTAGAAAATTCTAG
Upstream 100 bases:
>100_bases TAAAAAGTTTTATTTGACTCCAAGATTATTGAAATTACCATTAAATTAAATTAAATTAAATTAAATTTATTATTTTTAGT AATTAATATAAATTTTAACT
Downstream 100 bases:
>100_bases TTCAGTTAATTTAACAAAATGCTTATCTCTGCCTTTTTTAATGTTTCTTATACCCAATTAATTCTTAAGTAAAAAAGAAA GCACATAAAAAATATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MARARSNFRFSQCILFITLGMILGVGAIWPGFLTEKGRKCFLKIIQDSTDGNVTIGTLFSISPNYLIKIHNEKNKYNKIL LIGDFCFRKF
Sequences:
>Translated_90_residues MARARSNFRFSQCILFITLGMILGVGAIWPGFLTEKGRKCFLKIIQDSTDGNVTIGTLFSISPNYLIKIHNEKNKYNKIL LIGDFCFRKF >Mature_89_residues ARARSNFRFSQCILFITLGMILGVGAIWPGFLTEKGRKCFLKIIQDSTDGNVTIGTLFSISPNYLIKIHNEKNKYNKILL IGDFCFRKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10294; Mature: 10163
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARARSNFRFSQCILFITLGMILGVGAIWPGFLTEKGRKCFLKIIQDSTDGNVTIGTLFS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCCCCCCEEEEEEEE ISPNYLIKIHNEKNKYNKILLIGDFCFRKF ECCCEEEEEECCCCCCCEEEEEEHHHHHCC >Mature Secondary Structure ARARSNFRFSQCILFITLGMILGVGAIWPGFLTEKGRKCFLKIIQDSTDGNVTIGTLFS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCCCCCCEEEEEEEE ISPNYLIKIHNEKNKYNKILLIGDFCFRKF ECCCEEEEEECCCCCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA