| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965942
Identifier: 123965942
GI number: 123965942
Start: 641292
End: 641951
Strand: Direct
Name: 123965942
Synonym: P9515_07071
Alternate gene names: NA
Gene position: 641292-641951 (Clockwise)
Preceding gene: 123965941
Following gene: 123965943
Centisome position: 37.63
GC content: 28.03
Gene sequence:
>660_bases TTGAATAAGGAACTAACACATCGCTCCCATGAACTTAAAGCTCTTGGATGGAGCCAAGAAGATCTATCAAGATATGAAGA TTTATGGGACTATAGTCAAAGATGGGGATTGATTAATTTAGAGAGAGAGGATAGACAATTTTTAAAAAAAGCAGAAAAGT TGCTTCCGAAAATACAAAATAAAAAAGCATCAATTAAAAAATCTATTGAAGAGAAATCTTACTATTTATGGTTAAATTTT TATCTTGAAGAAATACAAATTTTTAATGAATCTTATTTACCCGAAAAACAAGTAAGTGTTTGGACTCTTATGATTGAAGA GGAGTTAAAACTTCTTAAAGAGTTGCAACCAGTAATGGGTCTGACAGATACTTTGAAGGCAAAAAATTTGTTTACTATTA GAAAACAACTAATTCAAAAAGCATATAATAAATACGGTGCCAAAAATAATAAAGAGCCTTTTGATTTCAGTGAAATTCTT AATAAATCTGAAAAAGATTTGAGTAAAAGCTGGAAATCTATTACTGAAAAAGATACTGAGGCAAATCAAACTTTTCCTAT TATTGATAGCAAAAAAATAGACGCTTTTAGAACTGACATAAATAAAGATTTAAAATCATTTATGAGGGAAAATTATCCAT CATTAAAAGAGGATTTATAA
Upstream 100 bases:
>100_bases CTTATTATCAAATTTCTTTAAATCAATTGAGTTGATCTTTTCTATTATTTACTTATACTAACTTCAGCGTTAAACTTATT AAGTTAAATAAGGTTATTTT
Downstream 100 bases:
>100_bases AGATTTATCTTGTTTATATTTATTTTTAGGAAGTTTTTAAGTTAAATAGATAATAGGATTAATTAAAAAATTTTGAGTAA CCAAAAGTTCGAGACTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNKELTHRSHELKALGWSQEDLSRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKASIKKSIEEKSYYLWLNF YLEEIQIFNESYLPEKQVSVWTLMIEEELKLLKELQPVMGLTDTLKAKNLFTIRKQLIQKAYNKYGAKNNKEPFDFSEIL NKSEKDLSKSWKSITEKDTEANQTFPIIDSKKIDAFRTDINKDLKSFMRENYPSLKEDL
Sequences:
>Translated_219_residues MNKELTHRSHELKALGWSQEDLSRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKASIKKSIEEKSYYLWLNF YLEEIQIFNESYLPEKQVSVWTLMIEEELKLLKELQPVMGLTDTLKAKNLFTIRKQLIQKAYNKYGAKNNKEPFDFSEIL NKSEKDLSKSWKSITEKDTEANQTFPIIDSKKIDAFRTDINKDLKSFMRENYPSLKEDL >Mature_219_residues MNKELTHRSHELKALGWSQEDLSRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKASIKKSIEEKSYYLWLNF YLEEIQIFNESYLPEKQVSVWTLMIEEELKLLKELQPVMGLTDTLKAKNLFTIRKQLIQKAYNKYGAKNNKEPFDFSEIL NKSEKDLSKSWKSITEKDTEANQTFPIIDSKKIDAFRTDINKDLKSFMRENYPSLKEDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26243; Mature: 26243
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKELTHRSHELKALGWSQEDLSRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQN CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KKASIKKSIEEKSYYLWLNFYLEEIQIFNESYLPEKQVSVWTLMIEEELKLLKELQPVMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC LTDTLKAKNLFTIRKQLIQKAYNKYGAKNNKEPFDFSEILNKSEKDLSKSWKSITEKDTE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCC ANQTFPIIDSKKIDAFRTDINKDLKSFMRENYPSLKEDL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure MNKELTHRSHELKALGWSQEDLSRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQN CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KKASIKKSIEEKSYYLWLNFYLEEIQIFNESYLPEKQVSVWTLMIEEELKLLKELQPVMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC LTDTLKAKNLFTIRKQLIQKAYNKYGAKNNKEPFDFSEILNKSEKDLSKSWKSITEKDTE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCC ANQTFPIIDSKKIDAFRTDINKDLKSFMRENYPSLKEDL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA