Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is glgA [H]

Identifier: 123965909

GI number: 123965909

Start: 609644

End: 611095

Strand: Direct

Name: glgA [H]

Synonym: P9515_06741

Alternate gene names: 123965909

Gene position: 609644-611095 (Clockwise)

Preceding gene: 123965908

Following gene: 123965910

Centisome position: 35.77

GC content: 35.88

Gene sequence:

>1452_bases
ATGAGAATTCTTCTTGCTGCTGCTGAATGTGCTCCAATGATCAAAGTTGGAGGGATGGGAGATGTCGTTGGTTCCTTACC
ACCATCATTGATAAAACTTGGTCACGACGTAAGGGTAATAATTCCAGGATATGGAAAATTGTGGAATCTACTAGAAATAT
CAAGTGAACCAGTCTTTAGAGCAAATACAATGGGGAATGAGTTTTCTGTATATGAAGCAAAACATCCGATACACAATTAT
ATAGTCTACTTAGTAGGGCATCCAACTTTTGATTCAGGACAGATATACGGTGGAGAAGATGAGGACTGGCGATTTACTTT
TTTTGCTAGTTCTACTGCAGAATTTTCTTGGAATTATTGGAAACCACAAGTCCTACATTGTCATGATTGGCATACTGGCA
TGATTCCTGTTTGGATGCATCAAGATCCTGAAATAAGTACTGTTTTTACTATACATAATTTAAAATATCAGGGACCATGG
AGGTGGAAACTTGAAAAAATGACGTGGTGTCCATGGTATATGCATGGTGACCATACTATGGCTGCTGCGATGCTTTATGC
AGATAGAGTTAATGCTGTTTCTCCAACATATGCCGATGAGATAAAAACGCATGAGTATGGGGAGAGTCTTGATGGACTGT
TGAATTATATTTCTGGAAAATTGAGAGGCATACTTAATGGCATAGATTTAAATGAATGGGATCCTAATATAGATAAAGTT
TTACCTGCTCAATTCAATATTAAAAATTTAGAAAGAAGATCAGAAAACAAGATAATTCTTCAAAAAGAAATGGGACTAGA
AGTTAATAGTAAAAAATATCTTTTAGGAATGGTTAGTAGATTAGTAGATCAAAAAGGCGTTGATTTGGTTTTGCAGGTCT
CTAAAAGATTACTAGCATATACAGATTCTCAAATAGCTATATTAGGCACAGGAGATAAATATTTAGAATCTGGATTATGG
CAATTAGCACTAGATTATCCCGGGAGATTTTCTGTATTTCTTACCTATGATGATTCTTTATCAAGGCTAATATATGGAGG
ATCTGATGCATTTTTAATGCCAAGTCGATTTGAACCCTGTGGTATCAGTCAATTACTTGCTATGAGGTATGGATCAATTC
CAATAGTAAGAAGAGTTGGAGGATTAGTTGATACTGTTTTGCCCCATGATCCAGAGAATAATTGTGGAACGGGATTTTGC
TTTGATCGATTCGAACCGATTGATTTTTATACGGCTTTAGTGAGATCTTGGGAGGCATTCAGACATAAGGATAGTTGGAA
ATTATTACAAATCAGAGCTATGAGCCAAGAATTCAGTTGGCAGAGATCAGCATTAGAGTACGAATTGATGTATAAGGATG
TATGCGGCATTAAGGAGCCATCACCAGATATTACTGAAATTGAAAAGTTTTCTTATGGTCAATCTGCTGATCCTTCTTTA
AAAAAAATATGA

Upstream 100 bases:

>100_bases
ATGCTTTCCTTGAGAAACGGCCACCTGATTTTTCTGATTGCGGATGGACTCCTTAATAGCTTATTTCTCTTCAAAAATAA
CTTTTTAAAATAATGAATCA

Downstream 100 bases:

>100_bases
TTTAATTTTTAATGGATTTTTCTGTATGTAATATAAATACAATTTTAGGGAATTTAAAAAATTCGGAGAATCTTAAAAAT
CAATCTCAAACTTTTAAAAA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWNLLEISSEPVFRANTMGNEFSVYEAKHPIHNY
IVYLVGHPTFDSGQIYGGEDEDWRFTFFASSTAEFSWNYWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKV
LPAQFNIKNLERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAYTDSQIAILGTGDKYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNCGTGFC
FDRFEPIDFYTALVRSWEAFRHKDSWKLLQIRAMSQEFSWQRSALEYELMYKDVCGIKEPSPDITEIEKFSYGQSADPSL
KKI

Sequences:

>Translated_483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWNLLEISSEPVFRANTMGNEFSVYEAKHPIHNY
IVYLVGHPTFDSGQIYGGEDEDWRFTFFASSTAEFSWNYWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKV
LPAQFNIKNLERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAYTDSQIAILGTGDKYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNCGTGFC
FDRFEPIDFYTALVRSWEAFRHKDSWKLLQIRAMSQEFSWQRSALEYELMYKDVCGIKEPSPDITEIEKFSYGQSADPSL
KKI
>Mature_483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWNLLEISSEPVFRANTMGNEFSVYEAKHPIHNY
IVYLVGHPTFDSGQIYGGEDEDWRFTFFASSTAEFSWNYWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKV
LPAQFNIKNLERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAYTDSQIAILGTGDKYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNCGTGFC
FDRFEPIDFYTALVRSWEAFRHKDSWKLLQIRAMSQEFSWQRSALEYELMYKDVCGIKEPSPDITEIEKFSYGQSADPSL
KKI

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=478, Percent_Identity=34.7280334728033, Blast_Score=287, Evalue=9e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 55202; Mature: 55202

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWNLLEISSEPVFR
CEEEEEECCCCCEEEECCCHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCEE
ANTMGNEFSVYEAKHPIHNYIVYLVGHPTFDSGQIYGGEDEDWRFTFFASSTAEFSWNYW
ECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCEECCC
KPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGDHTM
CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECEEECCCCEEEECCEEECEEEEECCHHH
AAAMLYADRVNAVSPTYADEIKTHEYGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
LPAQFNIKNLERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAY
CCCCCCHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
TDSQIAILGTGDKYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPC
CCCCEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCCEEEECCCCCEECCCCCCCC
GISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNCGTGFCFDRFEPIDFYTALVRSWEAF
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
RHKDSWKLLQIRAMSQEFSWQRSALEYELMYKDVCGIKEPSPDITEIEKFSYGQSADPSL
HCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHH
KKI
CCC
>Mature Secondary Structure
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWNLLEISSEPVFR
CEEEEEECCCCCEEEECCCHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCEE
ANTMGNEFSVYEAKHPIHNYIVYLVGHPTFDSGQIYGGEDEDWRFTFFASSTAEFSWNYW
ECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCEECCC
KPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGDHTM
CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECEEECCCCEEEECCEEECEEEEECCHHH
AAAMLYADRVNAVSPTYADEIKTHEYGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
LPAQFNIKNLERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAY
CCCCCCHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
TDSQIAILGTGDKYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPC
CCCCEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCCEEEECCCCCEECCCCCCCC
GISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNCGTGFCFDRFEPIDFYTALVRSWEAF
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
RHKDSWKLLQIRAMSQEFSWQRSALEYELMYKDVCGIKEPSPDITEIEKFSYGQSADPSL
HCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHH
KKI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA