| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is gloB [H]
Identifier: 123965858
GI number: 123965858
Start: 556977
End: 557717
Strand: Reverse
Name: gloB [H]
Synonym: P9515_06231
Alternate gene names: 123965858
Gene position: 557717-556977 (Counterclockwise)
Preceding gene: 123965862
Following gene: 123965857
Centisome position: 32.73
GC content: 29.96
Gene sequence:
>741_bases ATGGAATTTAATAAAGAGCAAACAATAATTGGAATTAGAGTTCTCAGTGATAATGTCATATGGTTATGGAGAAAGAATAA TTCAGCAGTAGTAATTGATCCTGCCCTTTCTCAACCTGTAATAGAATACCTAAAAACCCATAATCTTTATTTAAAAGCTA TTTTACAAACACATCATCACCACGATCATATTGGAGGGACAAGAGAACTTATAAAAGAATGGCCTAAGGTTAAAGTTATA GCTTCAGCAAAAGAAAAAGATCGAATACCATTTCAAAATTTATCTGTCAAAGATGGAGACAAGTTAAAATTATTAGACGA GGAAGTTCACGTGATAGAAGTAATAGGGCATACAAGATCACACCTGGCTTTCTACATTCATAATAAAGTTCCAATTCTTT TTATTGGTGATACGTTATTTTCAGCTGGATGTGGAAGAATATTTGAAGGAACTTACAAACAAATGTATAACTCACTTAAA AAAATAAAGTCATTACCTAAAAACACCACTATTTACTGTGCTCATGAGTATACAAAGTCAAATCTTTTATGGGCCTTAGA TCTTGAACCTGAAAACGAAAATATAAAAAATAAACTAATTGAAGTTGAAAAGAAAATTGCGTTAAAAGAACTTACAATTC CATTTCTACTCGAAGAAGAGTTGATAATTAATCTGTTTTTAAGAGCAGATAATTTAAAAAGATTTTCTTACTTAAGAGCA AATAAAGATACATGGGTTTAA
Upstream 100 bases:
>100_bases TTTTAAAAATTGAAATTGAATCCTCTAACAGAGCTCCTTTGGGTAAAGCTATAGTAATCATAGATCAATTTTTACGCAAT CTTTTAATTCTAAGGTAATA
Downstream 100 bases:
>100_bases ATTTATAGAAACATCTTTCATCAAATGTCCTCATCAAAAGTAATTAAGACTTCTAATGCCCCAGACCCAGTTGGTCCTTA TAACCAAGCTATAAAAGCAG
Product: putative hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MEFNKEQTIIGIRVLSDNVIWLWRKNNSAVVIDPALSQPVIEYLKTHNLYLKAILQTHHHHDHIGGTRELIKEWPKVKVI ASAKEKDRIPFQNLSVKDGDKLKLLDEEVHVIEVIGHTRSHLAFYIHNKVPILFIGDTLFSAGCGRIFEGTYKQMYNSLK KIKSLPKNTTIYCAHEYTKSNLLWALDLEPENENIKNKLIEVEKKIALKELTIPFLLEEELIINLFLRADNLKRFSYLRA NKDTWV
Sequences:
>Translated_246_residues MEFNKEQTIIGIRVLSDNVIWLWRKNNSAVVIDPALSQPVIEYLKTHNLYLKAILQTHHHHDHIGGTRELIKEWPKVKVI ASAKEKDRIPFQNLSVKDGDKLKLLDEEVHVIEVIGHTRSHLAFYIHNKVPILFIGDTLFSAGCGRIFEGTYKQMYNSLK KIKSLPKNTTIYCAHEYTKSNLLWALDLEPENENIKNKLIEVEKKIALKELTIPFLLEEELIINLFLRADNLKRFSYLRA NKDTWV >Mature_246_residues MEFNKEQTIIGIRVLSDNVIWLWRKNNSAVVIDPALSQPVIEYLKTHNLYLKAILQTHHHHDHIGGTRELIKEWPKVKVI ASAKEKDRIPFQNLSVKDGDKLKLLDEEVHVIEVIGHTRSHLAFYIHNKVPILFIGDTLFSAGCGRIFEGTYKQMYNSLK KIKSLPKNTTIYCAHEYTKSNLLWALDLEPENENIKNKLIEVEKKIALKELTIPFLLEEELIINLFLRADNLKRFSYLRA NKDTWV
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=222, Percent_Identity=34.2342342342342, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI94538320, Length=222, Percent_Identity=34.2342342342342, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI14150041, Length=223, Percent_Identity=34.5291479820628, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI46361987, Length=194, Percent_Identity=34.5360824742268, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI116642887, Length=230, Percent_Identity=33.9130434782609, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI21703352, Length=230, Percent_Identity=33.9130434782609, Blast_Score=119, Evalue=2e-27, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=37.8486055776892, Blast_Score=166, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17536925, Length=223, Percent_Identity=34.0807174887892, Blast_Score=139, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17538952, Length=192, Percent_Identity=29.6875, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320478, Length=239, Percent_Identity=30.9623430962343, Blast_Score=102, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6324614, Length=219, Percent_Identity=30.5936073059361, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356335, Length=252, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24667711, Length=252, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24667703, Length=252, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI221330176, Length=160, Percent_Identity=34.375, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28649; Mature: 28649
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFNKEQTIIGIRVLSDNVIWLWRKNNSAVVIDPALSQPVIEYLKTHNLYLKAILQTHHH CCCCCCCEEEEEEEECCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCC HDHIGGTRELIKEWPKVKVIASAKEKDRIPFQNLSVKDGDKLKLLDEEVHVIEVIGHTRS CCCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCC HLAFYIHNKVPILFIGDTLFSAGCGRIFEGTYKQMYNSLKKIKSLPKNTTIYCAHEYTKS EEEEEEECCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC NLLWALDLEPENENIKNKLIEVEKKIALKELTIPFLLEEELIINLFLRADNLKRFSYLRA CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHEEEEEECCCCHHHHHEEC NKDTWV CCCCCC >Mature Secondary Structure MEFNKEQTIIGIRVLSDNVIWLWRKNNSAVVIDPALSQPVIEYLKTHNLYLKAILQTHHH CCCCCCCEEEEEEEECCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCC HDHIGGTRELIKEWPKVKVIASAKEKDRIPFQNLSVKDGDKLKLLDEEVHVIEVIGHTRS CCCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCC HLAFYIHNKVPILFIGDTLFSAGCGRIFEGTYKQMYNSLKKIKSLPKNTTIYCAHEYTKS EEEEEEECCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC NLLWALDLEPENENIKNKLIEVEKKIALKELTIPFLLEEELIINLFLRADNLKRFSYLRA CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHEEEEEECCCCHHHHHEEC NKDTWV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA