| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965840
Identifier: 123965840
GI number: 123965840
Start: 541576
End: 541923
Strand: Direct
Name: 123965840
Synonym: P9515_06051
Alternate gene names: NA
Gene position: 541576-541923 (Clockwise)
Preceding gene: 123965839
Following gene: 123965841
Centisome position: 31.78
GC content: 27.59
Gene sequence:
>348_bases TTGTCTAGAAATTATTATAAAAGCATAGCTACAGATAAAAGATCTTTAGCATCTGCCATTGAAAAAAATTATAAAGATCA AGAAGATTTTGTAAGTTCTGTTTTTTTGGGGTTAAAAGTTTGTTTTACTCTTTTAGCTATGGTTAGTTTAATAAAAATTG GATATAGCTCAAAAATTAGATTAACTAGATTGAGGGAGATTAAAGATTCTTATTTATATGAAAAATCAAGGTTTGATGTT TTAAGTCGTAGATTTGATGATTTAATCTCATTTGAAGGCGAGCAAAGATTTATGAAGGATCAAGAGCAAATGATTTCTAG AGACATAATCAGAGTAATATGGCGTTGA
Upstream 100 bases:
>100_bases GTTTAGCTAGAATTTAAAATTAATTTTGAGTCCTAATAACTTTATGTTATTAATAAAATAGGACTTTTTTACTAGGTCTT TTAAAAATTCTTAAAAAAAT
Downstream 100 bases:
>100_bases TAAGTATGATTATAAAGTCATTCAATTATCGAATTTTTAATTAATTTTCTTAGCTAGTGGGTAATAGTACTAAAGGCCTT GTTTTAATAACAGGAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSRNYYKSIATDKRSLASAIEKNYKDQEDFVSSVFLGLKVCFTLLAMVSLIKIGYSSKIRLTRLREIKDSYLYEKSRFDV LSRRFDDLISFEGEQRFMKDQEQMISRDIIRVIWR
Sequences:
>Translated_115_residues MSRNYYKSIATDKRSLASAIEKNYKDQEDFVSSVFLGLKVCFTLLAMVSLIKIGYSSKIRLTRLREIKDSYLYEKSRFDV LSRRFDDLISFEGEQRFMKDQEQMISRDIIRVIWR >Mature_114_residues SRNYYKSIATDKRSLASAIEKNYKDQEDFVSSVFLGLKVCFTLLAMVSLIKIGYSSKIRLTRLREIKDSYLYEKSRFDVL SRRFDDLISFEGEQRFMKDQEQMISRDIIRVIWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13740; Mature: 13609
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNYYKSIATDKRSLASAIEKNYKDQEDFVSSVFLGLKVCFTLLAMVSLIKIGYSSKIR CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LTRLREIKDSYLYEKSRFDVLSRRFDDLISFEGEQRFMKDQEQMISRDIIRVIWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRNYYKSIATDKRSLASAIEKNYKDQEDFVSSVFLGLKVCFTLLAMVSLIKIGYSSKIR CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LTRLREIKDSYLYEKSRFDVLSRRFDDLISFEGEQRFMKDQEQMISRDIIRVIWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA