| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is psaM
Identifier: 123965839
GI number: 123965839
Start: 541388
End: 541492
Strand: Direct
Name: psaM
Synonym: P9515_06041
Alternate gene names: 123965839
Gene position: 541388-541492 (Clockwise)
Preceding gene: 123965837
Following gene: 123965840
Centisome position: 31.77
GC content: 32.38
Gene sequence:
>105_bases ATGGAACCATCTCAATCAATCAATTTAATTATCCTTGGTCTAATTGTAGTAATGCATGCAGGAGTATTAGCTTTAAGGCT TGGCATAAGTTTAGCTAGAATTTAA
Upstream 100 bases:
>100_bases CAAAATTATTTTTTAATTTAATTACGTAACAGCAATTTGTAATAGTCTATCAATTTTTCGCTTTTGGGTAGAGAATATAG AAAATAAATGTGTATTTATT
Downstream 100 bases:
>100_bases AATTAATTTTGAGTCCTAATAACTTTATGTTATTAATAAAATAGGACTTTTTTACTAGGTCTTTTAAAAATTCTTAAAAA AATTTGTCTAGAAATTATTA
Product: photosystem I reaction center subunit XII
Products: NA
Alternate protein names: PSI-M
Number of amino acids: Translated: 34; Mature: 34
Protein sequence:
>34_residues MEPSQSINLIILGLIVVMHAGVLALRLGISLARI
Sequences:
>Translated_34_residues MEPSQSINLIILGLIVVMHAGVLALRLGISLARI >Mature_34_residues MEPSQSINLIILGLIVVMHAGVLALRLGISLARI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PsaM family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAM_PROM5 (A2BVK2)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010920.1 - STRING: A2BVK2 - GeneID: 4719738 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_06041 - HOGENOM: HBG635194 - ProtClustDB: PRK11878 - GO: GO:0015979 - HAMAP: MF_00828 - InterPro: IPR010010 - TIGRFAMs: TIGR03053
Pfam domain/function: PF07465 PsaM
EC number: NA
Molecular weight: Translated: 3613; Mature: 3613
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18fa6904)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPSQSINLIILGLIVVMHAGVLALRLGISLARI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MEPSQSINLIILGLIVVMHAGVLALRLGISLARI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA