| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123965797
Identifier: 123965797
GI number: 123965797
Start: 503252
End: 504358
Strand: Reverse
Name: 123965797
Synonym: P9515_05621
Alternate gene names: NA
Gene position: 504358-503252 (Counterclockwise)
Preceding gene: 123965798
Following gene: 123965795
Centisome position: 29.6
GC content: 26.83
Gene sequence:
>1107_bases ATGGATTCATACAAGCAAGTTGTTGAGACAGCAGAGTTTGCTCTTATTAAAGGTGAATATAGTTTCTGTATTGAATATTT ATACCCAATAATCGAATCTTACCCTCCCTCAAGTAAAGAAGGAGTTAATTTACGAACAATAATGATAACAGCCTTATCTG GAATTAATAAAAAGGAAGAGGCAAAAATATTTTGTAAGGAACTTTTAAAATCTCATGATTTTAAAGTGAGAGATAATGCA AAGTATTTAATGGAAATCATCGATTCTCCTGAAATCAAGAAACCTGATAATTGGAATATTACCATTGAAAGTAATTCCAA CTTAAACAAAACATCTCTTACTTCTATAAAACCGAATAAAAATAAAAAGGAAAAAAAGTTTATAAACATCTCAAATATTC CAACAGGTGAAACAAAACCATTTCAGAAAGGATTTCTATTTATCATTTCTTTTTTATTATTATTACTAATTCCTCTTTTA AGCGGCTGCGTTAAAATTGATGACACCCTAGATCTTAGTGAGATTGACTCAATTAATAATAGTTTCGAAATTGAAAGCAA ATATATTAAAAAATTTCCTTGGCAAATAAATTTCGAACAGAAAGTCAAAGAAATTTTTCCTGATGCTGAAATATCAGAAG GAAATTTAGATTTTTCTTTTACAAATAAAAATCTAAATATCGAAACAGCTCAAGAAACCCTTTACAAAATAGAAAAAACA GCGAGTACATTATTAGGAGAATCAACTGATCTAAAAATTAATAGTGTTGAAAATAATTTTTTCTTTTTTAAAAAATATAT TTATAGTATAGATTTTGATCTTCATAATCTTTTATATGTTGATGATTTAGAACTAACTTTGAATATTATTAACCCAAATA GAGTTAGAGTTCGTGACCTAGATGAAAATAAGGTGGAATTATCTAAAAATTTTATAAAATGGCAATTAATCCCTGGAGAA TTAAATAGCCTGGAGTTCACATTTTGGATTTGGAACAAATTATTTTTAGGGTTTTTACTTATCTTAGTATCGATATTACT TACTTATTTAATAAGATTTTATAGATACCAGATAGGTTCTAACTTTCCAGAACTTCCTTCCAATTAG
Upstream 100 bases:
>100_bases GAGTAAGAGCTGCTCACATAATTGATGGAAGAATTGAGCATTCATTACTTCTAGAAATTTTCACAAACTCAGGGATTGGA ACAATGATTAATGCTTGATA
Downstream 100 bases:
>100_bases CTATAGCTCTACCGGATTCAGATCAAGTGATAAAAAGACATTTTTGGGAATTAATTGCCATAATTTAGCCCTATCTGGCA AAGGGACTTCCGAGTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MDSYKQVVETAEFALIKGEYSFCIEYLYPIIESYPPSSKEGVNLRTIMITALSGINKKEEAKIFCKELLKSHDFKVRDNA KYLMEIIDSPEIKKPDNWNITIESNSNLNKTSLTSIKPNKNKKEKKFINISNIPTGETKPFQKGFLFIISFLLLLLIPLL SGCVKIDDTLDLSEIDSINNSFEIESKYIKKFPWQINFEQKVKEIFPDAEISEGNLDFSFTNKNLNIETAQETLYKIEKT ASTLLGESTDLKINSVENNFFFFKKYIYSIDFDLHNLLYVDDLELTLNIINPNRVRVRDLDENKVELSKNFIKWQLIPGE LNSLEFTFWIWNKLFLGFLLILVSILLTYLIRFYRYQIGSNFPELPSN
Sequences:
>Translated_368_residues MDSYKQVVETAEFALIKGEYSFCIEYLYPIIESYPPSSKEGVNLRTIMITALSGINKKEEAKIFCKELLKSHDFKVRDNA KYLMEIIDSPEIKKPDNWNITIESNSNLNKTSLTSIKPNKNKKEKKFINISNIPTGETKPFQKGFLFIISFLLLLLIPLL SGCVKIDDTLDLSEIDSINNSFEIESKYIKKFPWQINFEQKVKEIFPDAEISEGNLDFSFTNKNLNIETAQETLYKIEKT ASTLLGESTDLKINSVENNFFFFKKYIYSIDFDLHNLLYVDDLELTLNIINPNRVRVRDLDENKVELSKNFIKWQLIPGE LNSLEFTFWIWNKLFLGFLLILVSILLTYLIRFYRYQIGSNFPELPSN >Mature_368_residues MDSYKQVVETAEFALIKGEYSFCIEYLYPIIESYPPSSKEGVNLRTIMITALSGINKKEEAKIFCKELLKSHDFKVRDNA KYLMEIIDSPEIKKPDNWNITIESNSNLNKTSLTSIKPNKNKKEKKFINISNIPTGETKPFQKGFLFIISFLLLLLIPLL SGCVKIDDTLDLSEIDSINNSFEIESKYIKKFPWQINFEQKVKEIFPDAEISEGNLDFSFTNKNLNIETAQETLYKIEKT ASTLLGESTDLKINSVENNFFFFKKYIYSIDFDLHNLLYVDDLELTLNIINPNRVRVRDLDENKVELSKNFIKWQLIPGE LNSLEFTFWIWNKLFLGFLLILVSILLTYLIRFYRYQIGSNFPELPSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42892; Mature: 42892
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSYKQVVETAEFALIKGEYSFCIEYLYPIIESYPPSSKEGVNLRTIMITALSGINKKEE CCHHHHHHHHHHHEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCCCCHHH AKIFCKELLKSHDFKVRDNAKYLMEIIDSPEIKKPDNWNITIESNSNLNKTSLTSIKPNK HHHHHHHHHHHCCCEECCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCC NKKEKKFINISNIPTGETKPFQKGFLFIISFLLLLLIPLLSGCVKIDDTLDLSEIDSINN CCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHCCCC SFEIESKYIKKFPWQINFEQKVKEIFPDAEISEGNLDFSFTNKNLNIETAQETLYKIEKT CEEHHHHHHHHCCCEECHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHH ASTLLGESTDLKINSVENNFFFFKKYIYSIDFDLHNLLYVDDLELTLNIINPNRVRVRDL HHHHHCCCCCEEEEECCCCCCEEEHHHHHCCCCCCCEEEEECEEEEEEEECCCEEEEEEC DENKVELSKNFIKWQLIPGELNSLEFTFWIWNKLFLGFLLILVSILLTYLIRFYRYQIGS CCCHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NFPELPSN CCCCCCCC >Mature Secondary Structure MDSYKQVVETAEFALIKGEYSFCIEYLYPIIESYPPSSKEGVNLRTIMITALSGINKKEE CCHHHHHHHHHHHEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCCCCHHH AKIFCKELLKSHDFKVRDNAKYLMEIIDSPEIKKPDNWNITIESNSNLNKTSLTSIKPNK HHHHHHHHHHHCCCEECCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCC NKKEKKFINISNIPTGETKPFQKGFLFIISFLLLLLIPLLSGCVKIDDTLDLSEIDSINN CCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHCCCC SFEIESKYIKKFPWQINFEQKVKEIFPDAEISEGNLDFSFTNKNLNIETAQETLYKIEKT CEEHHHHHHHHCCCEECHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHH ASTLLGESTDLKINSVENNFFFFKKYIYSIDFDLHNLLYVDDLELTLNIINPNRVRVRDL HHHHHCCCCCEEEEECCCCCCEEEHHHHHCCCCCCCEEEEECEEEEEEEECCCEEEEEEC DENKVELSKNFIKWQLIPGELNSLEFTFWIWNKLFLGFLLILVSILLTYLIRFYRYQIGS CCCHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NFPELPSN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA