Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965756

Identifier: 123965756

GI number: 123965756

Start: 467964

End: 468530

Strand: Reverse

Name: 123965756

Synonym: P9515_05211

Alternate gene names: NA

Gene position: 468530-467964 (Counterclockwise)

Preceding gene: 123965758

Following gene: 123965754

Centisome position: 27.49

GC content: 28.04

Gene sequence:

>567_bases
TTGAACGAAATAAATTCTAATAATTCAGACAATAATTCAATAAATAATTCTTCTTTAAAAAGAATTGGGAATTTTATCAA
AGAGGCCAGATTAAGCAGAAATCTTTCAATTGAAGAATTAGCTACTGATTTAAAAATTGGAACTCACCAACTTCAAGCAA
TAGAAGGCGGTAATGAAGAACATTTACCAGAAAAAGTTTTTATAAAAGCAATGGTTCGTAGAATTTCAGAAAAGCTTAAA
GTTGATACAGAATTTATAATGAACGAATTTAAAACTGAAAGACCGGAAGTAAAAGTTGAAGAAATTGTTCAGGAAGTTTT
AATCAAAACTAAACAAAACAAAAAAATCAAGAATAATAACTCTATTTTGTTTATTCTGATATCGGGAATTTTAGGCCTTT
TAGCCTCCTCTCTAATTTTTAATGTCATTTCAAACTCTTTCCAAAATCAAATTCCAAAACAAGAACTTAAAAAGAAAAAT
CAAACCACTTTTAACTCTAAGTTTTTGAGTTCTTTAATCGCATTGCGACATGATTCTAAGCTCCATTTCTCAAGAAGAAG
ATCTTGA

Upstream 100 bases:

>100_bases
TCTTTATAACCCTTCTTACAATCATCTCTTTAGGAATAAATAATCGATTAAAGTTGATAGATAAATATAAATCACTATAA
TTGAGAAAAAATCAATTGCT

Downstream 100 bases:

>100_bases
TTTGAATTAAAAGGTATTATTTCCATTGAAAGAGCATTTTTTTGTAATTTAATTTTTATTGATGATATTACATTCTCAGG
TCTTTGATCCAAGGACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEEHLPEKVFIKAMVRRISEKLK
VDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNNSILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKN
QTTFNSKFLSSLIALRHDSKLHFSRRRS

Sequences:

>Translated_188_residues
MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEEHLPEKVFIKAMVRRISEKLK
VDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNNSILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKN
QTTFNSKFLSSLIALRHDSKLHFSRRRS
>Mature_188_residues
MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEEHLPEKVFIKAMVRRISEKLK
VDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNNSILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKN
QTTFNSKFLSSLIALRHDSKLHFSRRRS

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21576; Mature: 21576

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
HLPEKVFIKAMVRRISEKLKVDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKNQTTFNSKFLSSLIALRHDSK
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCH
LHFSRRRS
HHHHHCCC
>Mature Secondary Structure
MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
HLPEKVFIKAMVRRISEKLKVDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKNQTTFNSKFLSSLIALRHDSK
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCH
LHFSRRRS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA