| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123965756
Identifier: 123965756
GI number: 123965756
Start: 467964
End: 468530
Strand: Reverse
Name: 123965756
Synonym: P9515_05211
Alternate gene names: NA
Gene position: 468530-467964 (Counterclockwise)
Preceding gene: 123965758
Following gene: 123965754
Centisome position: 27.49
GC content: 28.04
Gene sequence:
>567_bases TTGAACGAAATAAATTCTAATAATTCAGACAATAATTCAATAAATAATTCTTCTTTAAAAAGAATTGGGAATTTTATCAA AGAGGCCAGATTAAGCAGAAATCTTTCAATTGAAGAATTAGCTACTGATTTAAAAATTGGAACTCACCAACTTCAAGCAA TAGAAGGCGGTAATGAAGAACATTTACCAGAAAAAGTTTTTATAAAAGCAATGGTTCGTAGAATTTCAGAAAAGCTTAAA GTTGATACAGAATTTATAATGAACGAATTTAAAACTGAAAGACCGGAAGTAAAAGTTGAAGAAATTGTTCAGGAAGTTTT AATCAAAACTAAACAAAACAAAAAAATCAAGAATAATAACTCTATTTTGTTTATTCTGATATCGGGAATTTTAGGCCTTT TAGCCTCCTCTCTAATTTTTAATGTCATTTCAAACTCTTTCCAAAATCAAATTCCAAAACAAGAACTTAAAAAGAAAAAT CAAACCACTTTTAACTCTAAGTTTTTGAGTTCTTTAATCGCATTGCGACATGATTCTAAGCTCCATTTCTCAAGAAGAAG ATCTTGA
Upstream 100 bases:
>100_bases TCTTTATAACCCTTCTTACAATCATCTCTTTAGGAATAAATAATCGATTAAAGTTGATAGATAAATATAAATCACTATAA TTGAGAAAAAATCAATTGCT
Downstream 100 bases:
>100_bases TTTGAATTAAAAGGTATTATTTCCATTGAAAGAGCATTTTTTTGTAATTTAATTTTTATTGATGATATTACATTCTCAGG TCTTTGATCCAAGGACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEEHLPEKVFIKAMVRRISEKLK VDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNNSILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKN QTTFNSKFLSSLIALRHDSKLHFSRRRS
Sequences:
>Translated_188_residues MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEEHLPEKVFIKAMVRRISEKLK VDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNNSILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKN QTTFNSKFLSSLIALRHDSKLHFSRRRS >Mature_188_residues MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEEHLPEKVFIKAMVRRISEKLK VDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNNSILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKN QTTFNSKFLSSLIALRHDSKLHFSRRRS
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21576; Mature: 21576
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC HLPEKVFIKAMVRRISEKLKVDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC SILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKNQTTFNSKFLSSLIALRHDSK CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCH LHFSRRRS HHHHHCCC >Mature Secondary Structure MNEINSNNSDNNSINNSSLKRIGNFIKEARLSRNLSIEELATDLKIGTHQLQAIEGGNEE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC HLPEKVFIKAMVRRISEKLKVDTEFIMNEFKTERPEVKVEEIVQEVLIKTKQNKKIKNNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC SILFILISGILGLLASSLIFNVISNSFQNQIPKQELKKKNQTTFNSKFLSSLIALRHDSK CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCH LHFSRRRS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA