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The map label for this gene is dppC [H]

Identifier: 123965717

GI number: 123965717

Start: 430911

End: 431657

Strand: Direct

Name: dppC [H]

Synonym: P9515_04821

Alternate gene names: 123965717

Gene position: 430911-431657 (Clockwise)

Preceding gene: 123965716

Following gene: 123965719

Centisome position: 25.29

GC content: 33.33

Gene sequence:

>747_bases
ATGAAAGTACTAGAGGCTAATAACTTTTTTGGATATTCTGTATCATCATTTAGTAGTGACGTTTTTTCACCACCTTCCCT
GAAACATTTATGTGGTACTGATAGGTTAGGCAGAGATGTTTGTTTACGAACTTTACAAGGATCATCTATAGCTATTGAAG
TTGTATTCCTTTCTATTTTCTTTGCTTTAATTTTAGGCTTGCCTTTAGGATTATTGAGTGGATATTTTGGAGGGATATTT
GATAAATGCTTATCACTCATAATGGATACTATTTTTTCTATCCCAGTTATTTTACTTTCAGTAGTGGTAGCTTTTGTACT
GGGTAAAGGGATTATTAATGCCTCTATCGCATTATGTATTGTTTATTCTCCTCAATATTTCAGGTTAATTAGAAATCAAA
CAATACTAATAAAATCAGAGACATATGTTGAAGCTGCAAGAGTATCAGGAGCTGATATTAAAACTATAATTTTTAAATAT
ATATTCCCAAATGTTATTACTCCATTGCCTATTCTTCTTACTTTAAATGCTGCCGATGCGGTTTTAGTTTTGGGAAGCTT
AGGCTTTTTAGGTTTAGGAGTTCCCGCAGATGTTCCAGAATGGGGCAGTGATCTTAATCTTGCTCTTGCTGCTCTACCTA
CTGGAATATGGTGGACTGCTTTATTCCCTGGATTAGCAATGTTTTTTTTAGTCCTAGGTCTTTCTTTTATAGGAGAAGAA
ATAGAAAATATTTTTGAGAAGCAATAG

Upstream 100 bases:

>100_bases
TCATAAAGCTGTGAATGCAAATCCATCAAGTCAAGTTGCTAAGAATATTAGAAAAACTGGATTTGTAATTGTACTTGTAT
ATCTTCTAATAGTATTGATT

Downstream 100 bases:

>100_bases
TTGACTTTTTTTTATTATTGTTTTTTTATAACTTCATTAATTTCTCCATCCTGATTAAGGGTTGGATATTTATTTCCAGA
CTTTTTATAAATAGAGGCTA

Product: putative ABC transporter, oligopeptides

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKVLEANNFFGYSVSSFSSDVFSPPSLKHLCGTDRLGRDVCLRTLQGSSIAIEVVFLSIFFALILGLPLGLLSGYFGGIF
DKCLSLIMDTIFSIPVILLSVVVAFVLGKGIINASIALCIVYSPQYFRLIRNQTILIKSETYVEAARVSGADIKTIIFKY
IFPNVITPLPILLTLNAADAVLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGEE
IENIFEKQ

Sequences:

>Translated_248_residues
MKVLEANNFFGYSVSSFSSDVFSPPSLKHLCGTDRLGRDVCLRTLQGSSIAIEVVFLSIFFALILGLPLGLLSGYFGGIF
DKCLSLIMDTIFSIPVILLSVVVAFVLGKGIINASIALCIVYSPQYFRLIRNQTILIKSETYVEAARVSGADIKTIIFKY
IFPNVITPLPILLTLNAADAVLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGEE
IENIFEKQ
>Mature_248_residues
MKVLEANNFFGYSVSSFSSDVFSPPSLKHLCGTDRLGRDVCLRTLQGSSIAIEVVFLSIFFALILGLPLGLLSGYFGGIF
DKCLSLIMDTIFSIPVILLSVVVAFVLGKGIINASIALCIVYSPQYFRLIRNQTILIKSETYVEAARVSGADIKTIIFKY
IFPNVITPLPILLTLNAADAVLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGEE
IENIFEKQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=247, Percent_Identity=34.8178137651822, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1789964, Length=240, Percent_Identity=35.4166666666667, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1787760, Length=229, Percent_Identity=35.3711790393013, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1789889, Length=228, Percent_Identity=30.2631578947368, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787549, Length=237, Percent_Identity=31.6455696202532, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787498, Length=228, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788505, Length=254, Percent_Identity=27.1653543307087, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26849; Mature: 26849

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLEANNFFGYSVSSFSSDVFSPPSLKHLCGTDRLGRDVCLRTLQGSSIAIEVVFLSIF
CCEEECCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
FALILGLPLGLLSGYFGGIFDKCLSLIMDTIFSIPVILLSVVVAFVLGKGIINASIALCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEE
VYSPQYFRLIRNQTILIKSETYVEAARVSGADIKTIIFKYIFPNVITPLPILLTLNAADA
EECHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEECCHHH
VLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGEE
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IENIFEKQ
HHHHHCCC
>Mature Secondary Structure
MKVLEANNFFGYSVSSFSSDVFSPPSLKHLCGTDRLGRDVCLRTLQGSSIAIEVVFLSIF
CCEEECCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
FALILGLPLGLLSGYFGGIFDKCLSLIMDTIFSIPVILLSVVVAFVLGKGIINASIALCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEE
VYSPQYFRLIRNQTILIKSETYVEAARVSGADIKTIIFKYIFPNVITPLPILLTLNAADA
EECHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEECCHHH
VLVLGSLGFLGLGVPADVPEWGSDLNLALAALPTGIWWTALFPGLAMFFLVLGLSFIGEE
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IENIFEKQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]