| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is psaE
Identifier: 123965596
GI number: 123965596
Start: 338421
End: 338630
Strand: Reverse
Name: psaE
Synonym: P9515_03611
Alternate gene names: 123965596
Gene position: 338630-338421 (Counterclockwise)
Preceding gene: 123965597
Following gene: 123965595
Centisome position: 19.87
GC content: 32.38
Gene sequence:
>210_bases ATGACAATTGCAAGAGGGGATTTTGTTCGTATTAAAAGAAAGGAATCTTACTGGTATAACGATACAGGGAAGGTGGCTTC TATAGATAAATCAGGGATTAAGTATAATGTGACTGTTAAATTTGATAGAGTTAATTTCTATGGAATAAGTGGAACTGACG GTGGAAACGTGACAAATAACTTTGCTGAAGTTGAATTAGAAAAAATTTAA
Upstream 100 bases:
>100_bases TAATAAATGATTTCTGCTAATCGTTTTGATTAATATGTGTGAATAATTTTTCATTGGATATACCTTTTGAGGTATTGTCT TATTAGTGAAATTCAAATTT
Downstream 100 bases:
>100_bases AAATTTGCCTGAGTTACCTGAAGTTGAAACTGTTAGAAAAGGTTTAGAGCAAAAACTTAAGAATTTTATTATCAAAAGAG TTGAAATCTGTAGAGAATCA
Product: photosystem I reaction center subunit IV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTIARGDFVRIKRKESYWYNDTGKVASIDKSGIKYNVTVKFDRVNFYGISGTDGGNVTNNFAEVELEKI
Sequences:
>Translated_69_residues MTIARGDFVRIKRKESYWYNDTGKVASIDKSGIKYNVTVKFDRVNFYGISGTDGGNVTNNFAEVELEKI >Mature_68_residues TIARGDFVRIKRKESYWYNDTGKVASIDKSGIKYNVTVKFDRVNFYGISGTDGGNVTNNFAEVELEKI
Specific function: Stabilizes the interaction between psaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAE_PROM5 (A2BUV9)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010677.1 - ProteinModelPortal: A2BUV9 - SMR: A2BUV9 - STRING: A2BUV9 - GeneID: 4719677 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_03611 - eggNOG: NOG08807 - HOGENOM: HBG599647 - OMA: GINTNNF - ProtClustDB: PRK02749 - BioCyc: PMAR167542:P9515ORF_0385-MONOMER - GO: GO:0009536 - GO: GO:0015979 - HAMAP: MF_00613 - InterPro: IPR008990 - InterPro: IPR003375 - ProDom: PD004772
Pfam domain/function: PF02427 PSI_PsaE; SSF50090 E_transp_acc
EC number: NA
Molecular weight: Translated: 7828; Mature: 7697
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIARGDFVRIKRKESYWYNDTGKVASIDKSGIKYNVTVKFDRVNFYGISGTDGGNVTNN CCCCCCCEEEEEECCCEEECCCCCEEEECCCCCEEEEEEEECCEEEEEECCCCCCCCCCC FAEVELEKI EEEEEEEEC >Mature Secondary Structure TIARGDFVRIKRKESYWYNDTGKVASIDKSGIKYNVTVKFDRVNFYGISGTDGGNVTNN CCCCCCEEEEEECCCEEECCCCCEEEECCCCCEEEEEEEECCEEEEEECCCCCCCCCCC FAEVELEKI EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA