| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965594
Identifier: 123965594
GI number: 123965594
Start: 330351
End: 331790
Strand: Reverse
Name: 123965594
Synonym: P9515_03591
Alternate gene names: NA
Gene position: 331790-330351 (Counterclockwise)
Preceding gene: 123965595
Following gene: 123965591
Centisome position: 19.47
GC content: 36.94
Gene sequence:
>1440_bases ATGGCAGAAAGATTCAGTCAAAAAAATTTAAGAGTTCGTCCAAGTTCAGATGAAGACAAAATTGTAACAAATGCAAAAGA ACACTTTGAAAAGACCTTAATTAAGATATCAGGGGAGCTGGTCGGCAGTGTTGCCGCATTAGAACATCCTTCCAAAAACC TCAAATTAAATTATGGAGAAATATTTCTAAGAGATAATGTTCCAGTAATGATTTATCTCATCACACAAAAAAGGTACGAC ATTGTTAGAAAGTTCCTAAGTGTATGCCTTGAACTACAAAGCACTAGTTATCAAACACGTGGAGTATTTCCTACAAGTTT TGTTGAAGAGAAAGGAAAATTAATTGGAGACTATGGTCAGAGATCAATAGGGAGAATCACCTCTGCTGATGCAAGTTTAT GGTGGCCTATATTATGTTGGTATTATGTCAATAAAAGTGGTGATTATTCATTCGGCAAAAGCCAAAGCGTGCAGAGAGGA ATACAACTTTTACTAGATTTAGTTTTACATCCAACATTTGAGGGGACACCTGTTCTTTTCGTACCCGATTGTGCATTCAT GATTGATAGACCAATGGATGTATGGGGGGCTCCTTTGGAAGTAGAGGTATTACTTCATGGATGTTTGAAAAGCTGTATTA ACCTTATGGAATTAAGTCGTGAAGATCACGTTAGTAGGTTATTAGATCAAAGACTAATTCTTACTAGTCAATGGGTTGAA GATCTAAGAAGTTTTCTTTTAAAACATTACTGGGTTACAAGCCAAACGATGCAAATCCTAAGAAGAAGGCCTACAGAACA ATATGGAGAGGACCAACACTTCAATGAATTTAATGTTCAGCCTCAAGTGGTGCCATCATGGCTTCAAGAGTGGTTGGAGA ACAGAGGTGGGTATTTGATAGGGAACATTAGGACAGGTAGACCCGATTTTAGATTTTATAGCTTAGGAAACTCTTTAGCA TGTATGTTCGGAGTGTTACCTTCTTCAGAACAAAGAGCACTTTTTAGACTAGTACTTCACAACAGGCAACATCTAATAGC ACAAATGCCAATGAGGATATGTCATCCTCATATGGATGTAGAAGAATGGCAGAATAAAACGGGATCAGATCCTAAAAATT GGCCTTGGAGCTACCACAATGGAGGGCATTGGCCAAGTTTACTTTGGTTTTTCGGGACTTCGGTTCTTTTACATCAAAAA AGATTTCCTACTGAAGATGTGATTTTAATGGAAGAGATGAGATCCTTAATTGAAGAATCTTATTGGTGTCAACTAAATCA ATTACCAAAACAAGAGTGGGCAGAATATTTTGATGGGCCTACTGGTACATGGGTTGGACAGCAATCAAGAACTTATCAAA CATGGACAATAGTTGGTTTTTTATTAATGCATCATTTCCTAAGAGAAGAGAATAATGATTTGGATATGTTTGACCTCTAA
Upstream 100 bases:
>100_bases TGTAATTGTGCAACCTTTTATACAAAATTTTTTATTAATTTTTATTTTCGTTCAAAGTCTATTTAAAGAACTAGTCTTAT ATCAAAGGGATTTAAATGAA
Downstream 100 bases:
>100_bases ATGACCTTAAAATAATCCTAAAGTTAGAGACTTATCAATTGGTAAGCAAGCACCTATTCCAAGGTAAATAGTTAAAAAAG TTCCAAAAAGAAAAACCACC
Product: putative neutral invertase-like protein
Products: NA
Alternate protein names: Neutral Invertase-Like Protein; Neutral Invertase Like Protein; Plant Neutral Invertase Superfamily; LIM17 Protein
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAERFSQKNLRVRPSSDEDKIVTNAKEHFEKTLIKISGELVGSVAALEHPSKNLKLNYGEIFLRDNVPVMIYLITQKRYD IVRKFLSVCLELQSTSYQTRGVFPTSFVEEKGKLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYSFGKSQSVQRG IQLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSREDHVSRLLDQRLILTSQWVE DLRSFLLKHYWVTSQTMQILRRRPTEQYGEDQHFNEFNVQPQVVPSWLQEWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLPSSEQRALFRLVLHNRQHLIAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTSVLLHQK RFPTEDVILMEEMRSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHFLREENNDLDMFDL
Sequences:
>Translated_479_residues MAERFSQKNLRVRPSSDEDKIVTNAKEHFEKTLIKISGELVGSVAALEHPSKNLKLNYGEIFLRDNVPVMIYLITQKRYD IVRKFLSVCLELQSTSYQTRGVFPTSFVEEKGKLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYSFGKSQSVQRG IQLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSREDHVSRLLDQRLILTSQWVE DLRSFLLKHYWVTSQTMQILRRRPTEQYGEDQHFNEFNVQPQVVPSWLQEWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLPSSEQRALFRLVLHNRQHLIAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTSVLLHQK RFPTEDVILMEEMRSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHFLREENNDLDMFDL >Mature_478_residues AERFSQKNLRVRPSSDEDKIVTNAKEHFEKTLIKISGELVGSVAALEHPSKNLKLNYGEIFLRDNVPVMIYLITQKRYDI VRKFLSVCLELQSTSYQTRGVFPTSFVEEKGKLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYSFGKSQSVQRGI QLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSREDHVSRLLDQRLILTSQWVED LRSFLLKHYWVTSQTMQILRRRPTEQYGEDQHFNEFNVQPQVVPSWLQEWLENRGGYLIGNIRTGRPDFRFYSLGNSLAC MFGVLPSSEQRALFRLVLHNRQHLIAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTSVLLHQKR FPTEDVILMEEMRSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHFLREENNDLDMFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56107; Mature: 55976
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERFSQKNLRVRPSSDEDKIVTNAKEHFEKTLIKISGELVGSVAALEHPSKNLKLNYGE CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCE IFLRDNVPVMIYLITQKRYDIVRKFLSVCLELQSTSYQTRGVFPTSFVEEKGKLIGDYGQ EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHCC RSIGRITSADASLWWPILCWYYVNKSGDYSFGKSQSVQRGIQLLLDLVLHPTFEGTPVLF HHHCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSREDHVSRLLDQRLILTSQWVE ECCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH DLRSFLLKHYWVTSQTMQILRRRPTEQYGEDQHFNEFNVQPQVVPSWLQEWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLPSSEQRALFRLVLHNRQHLIAQMPMRICHPHMDV EEEECCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTSVLLHQKRFPTEDVILMEEMRSLIEES HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHFLREENNDLDMFDL HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AERFSQKNLRVRPSSDEDKIVTNAKEHFEKTLIKISGELVGSVAALEHPSKNLKLNYGE CCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCE IFLRDNVPVMIYLITQKRYDIVRKFLSVCLELQSTSYQTRGVFPTSFVEEKGKLIGDYGQ EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHCC RSIGRITSADASLWWPILCWYYVNKSGDYSFGKSQSVQRGIQLLLDLVLHPTFEGTPVLF HHHCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSREDHVSRLLDQRLILTSQWVE ECCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH DLRSFLLKHYWVTSQTMQILRRRPTEQYGEDQHFNEFNVQPQVVPSWLQEWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLPSSEQRALFRLVLHNRQHLIAQMPMRICHPHMDV EEEECCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGTSVLLHQKRFPTEDVILMEEMRSLIEES HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHFLREENNDLDMFDL HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA